RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 BSDC1Q9NW68 430 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 SNTG2Q9NY99 539 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 CCDC39Q9UFE4 941 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 POLR3KQ9Y2Y1 108 aaPredicted RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 RNF114Q9Y508 228 aa2.73□□□□□ -1.97
SMN2-208ENST00000508258 MRPL42Q9Y6G3 142 aaKnown RBP2.73□□□□□ -1.97
SMN2-208ENST00000508258 MEIS3P2A8K0S8 358 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 U2SURPO15042 1029 aaKnown RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 PPM1GO15355 546 aaPredicted RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 ZNF862O60290 1169 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 FAM87AP0C7U9 286 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 MCM4P33991 863 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 TXKP42681 527 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 TTLL4Q14679 1199 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 DDR2Q16832 855 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 PLEKHG4Q58EX7 1191 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 GK5Q6ZS86 529 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 LSRQ86X29 649 aaPredicted RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 SMYD4Q8IYR2 804 aaPredicted RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 LILRB2Q8N423 598 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 JMYQ8N9B5 988 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 C19orf47Q8N9M1 422 aaKnown RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 FANCD2OSQ96PS1 177 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 FERD3LQ96RJ6 166 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 CRBNQ96SW2 442 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 TNKS2Q9H2K2 1166 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 C1GALT1Q9NS00 363 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 KRT82Q9NSB4 513 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 ACTR10Q9NZ32 417 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 CRIM1Q9NZV1 1036 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 ZC3H7BQ9UGR2 993 aaKnown RBP2.72□□□□□ -1.97
SMN2-208ENST00000508258 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.72□□□□□ -1.97
SMN2-208ENST00000508258 PCDHB14Q9Y5E9 798 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 CSADQ9Y600 493 aa2.72□□□□□ -1.97
SMN2-208ENST00000508258 PDPK1O15530 556 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 BPNT1O95861 308 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 ITIH2P19823 946 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 CDK8P49336 464 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 RING1Q06587 406 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 RASGRF1Q13972 1273 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 PLCL1Q15111 1095 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 MSMPQ1L6U9 139 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 LRRFIP1Q32MZ4 808 aaKnown RBP2.71□□□□□ -1.98
SMN2-208ENST00000508258 DIEXFQ68CQ4 756 aaKnown RBP2.71□□□□□ -1.98
SMN2-208ENST00000508258 OGFOD3Q6PK18 319 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMN2-208ENST00000508258 ANKRD13AQ8IZ07 590 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 FAM181AQ8N9Y4 354 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 AGBL5Q8NDL9 886 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 GPBAR1Q8TDU6 330 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 MICAL1Q8TDZ2 1067 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 GATA6Q92908 595 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 DNAJC7Q99615 494 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 TM9SF2Q99805 663 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 KANSL2Q9H9L4 492 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 DISC1Q9NRI5 854 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 PCOLCE2Q9UKZ9 415 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 SLC5A6Q9Y289 635 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 R3HCC1Q9Y3T6 440 aaKnown RBP2.71□□□□□ -1.98
SMN2-208ENST00000508258 TACC3Q9Y6A5 838 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 SNCAIPQ9Y6H5 919 aa2.71□□□□□ -1.98
SMN2-208ENST00000508258 A0A1W2PQH9 124 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 DCDC2CA8MYV0 355 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 GRIN3BO60391 1043 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 LEFTY1O75610 366 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 PRNPP04156 253 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 INPP5AQ14642 412 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 FXNQ16595 210 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 KIF4BQ2VIQ3 1234 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 FBXW10Q5XX13 1052 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 INTS3Q68E01 1043 aaKnown RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 LRFN4Q6PJG9 635 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ZNF574Q6ZN55 896 aaPredicted RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 RUFY4Q6ZNE9 571 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 CDC37L1Q7L3B6 337 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 CYFIP1Q7L576 1253 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 TTC6Q86TZ1 520 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 PLD6Q8N2A8 252 aaKnown RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 TAB3Q8N5C8 712 aaPredicted RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 TOP6BLQ8N6T0 577 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 SH3TC2Q8TF17 1288 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ISL2Q96A47 359 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ELMO3Q96BJ8 720 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ZNF669Q96BR6 464 aaPredicted RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 PLPPR2Q96GM1 343 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 GPATCH3Q96I76 525 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 KRTAP9-2Q9BYQ4 174 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 BRINP2Q9C0B6 783 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 GSX1Q9H4S2 264 aaPredicted RBP2.7□□□□□ -1.98
SMN2-208ENST00000508258 ANTXR1Q9H6X2 564 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ST7Q9NRC1 585 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 TMEM260Q9NX78 707 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 ADGRE2Q9UHX3 823 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 PCDHA4Q9UN74 947 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 MAPK8IP1Q9UQF2 711 aa2.7□□□□□ -1.98
SMN2-208ENST00000508258 SYNGAP1Q96PV0 1343 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 KRTAP9-6A0A140TA67 174 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 PRAMEF27A3QJZ7 478 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms