RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 DEFB118Q96PH6 123 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 EHD4Q9H223 541 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 PORCNQ9H237 461 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 PCDH10Q9P2E7 1040 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
NEDD4-207ENST00000508075 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
NEDD4-207ENST00000508075 GABPAQ06546 454 aa17.42■□□□□ 0.38
NEDD4-207ENST00000508075 KIAA1755Q5JYT7 1200 aa17.42■□□□□ 0.38
NEDD4-207ENST00000508075 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
NEDD4-207ENST00000508075 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
NEDD4-207ENST00000508075 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
NEDD4-207ENST00000508075 GJB1P08034 283 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 AKR1B1P15121 316 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 HOXA7P31268 230 aaPredicted RBP17.41■□□□□ 0.38
NEDD4-207ENST00000508075 GJA8P48165 433 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
NEDD4-207ENST00000508075 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 MORF4L1Q9UBU8 362 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 ALPK3Q96L96 1907 aa17.41■□□□□ 0.38
NEDD4-207ENST00000508075 H0YGN5 161 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 CNMDO75829 334 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 VCAM1P19320 739 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 IRF5Q13568 498 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 CCL14Q16627 93 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
NEDD4-207ENST00000508075 TRIB2Q92519 343 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 DPF3Q92784 378 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
NEDD4-207ENST00000508075 SLC4A4Q9Y6R1 1079 aa17.4■□□□□ 0.38
NEDD4-207ENST00000508075 USP17L12C9JPN9 530 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L21D6R901 530 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 IGSF3O75054 1194 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
NEDD4-207ENST00000508075 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 ERVK-24P63145 666 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 CERS3Q8IU89 383 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
NEDD4-207ENST00000508075 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
NEDD4-207ENST00000508075 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
NEDD4-207ENST00000508075 SGPL1O95470 568 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 PXYLP1Q8TE99 480 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.37
NEDD4-207ENST00000508075 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.38■□□□□ 0.37
NEDD4-207ENST00000508075 ECHDC1Q9NTX5 307 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 BTBD7Q9P203 1132 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 RLFQ13129 1914 aa17.38■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L15C9J2P7 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L13C9JLJ4 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L11C9JVI0 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L18D6R9N7 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L22D6RA61 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L17D6RBQ6 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L19D6RCP7 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L20D6RJB6 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 USP17L24Q0WX57 530 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 KIAA1683Q9H0B3 1180 aa17.37■□□□□ 0.37
NEDD4-207ENST00000508075 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
NEDD4-207ENST00000508075 COL11A1P12107 1806 aaPredicted RBP17.36■□□□□ 0.37
NEDD4-207ENST00000508075 HMGCRP04035 888 aa17.36■□□□□ 0.37
NEDD4-207ENST00000508075 CDK8P49336 464 aa17.36■□□□□ 0.37
NEDD4-207ENST00000508075 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
NEDD4-207ENST00000508075 HABP4Q5JVS0 413 aaKnown RBP17.36■□□□□ 0.37
NEDD4-207ENST00000508075 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
NEDD4-207ENST00000508075 SIAH1Q8IUQ4 282 aa17.36■□□□□ 0.37
NEDD4-207ENST00000508075 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
NEDD4-207ENST00000508075 OSBP2Q969R2 916 aa17.36■□□□□ 0.37
NEDD4-207ENST00000508075 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
NEDD4-207ENST00000508075 PARP14Q460N5 1801 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 SPDYE16A6NNV3 312 aaPredicted RBP17.35■□□□□ 0.37
NEDD4-207ENST00000508075 M0R2C6 588 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 NKX2-3Q8TAU0 364 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 PAWRQ96IZ0 340 aaKnown RBP17.35■□□□□ 0.37
NEDD4-207ENST00000508075 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
NEDD4-207ENST00000508075 NUDT12Q9BQG2 462 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
NEDD4-207ENST00000508075 PAK6Q9NQU5 681 aaPredicted RBP17.35■□□□□ 0.37
NEDD4-207ENST00000508075 CEP290O15078 2479 aa17.34■□□□□ 0.37
NEDD4-207ENST00000508075 RAD21O60216 631 aa17.34■□□□□ 0.37
NEDD4-207ENST00000508075 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
NEDD4-207ENST00000508075 PLEKHH3Q7Z736 793 aa17.34■□□□□ 0.37
NEDD4-207ENST00000508075 ATP8A2Q9NTI2 1148 aa17.34■□□□□ 0.37
NEDD4-207ENST00000508075 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
NEDD4-207ENST00000508075 MINDY4BA8MYZ0 360 aa17.33■□□□□ 0.36
NEDD4-207ENST00000508075 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
NEDD4-207ENST00000508075 MAPK4P31152 587 aa17.33■□□□□ 0.36
NEDD4-207ENST00000508075 USP14P54578 494 aa17.33■□□□□ 0.36
NEDD4-207ENST00000508075 ICA1Q05084 483 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms