RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 ZNF277Q9NRM2 450 aaPredicted RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 SERPINB13Q9UIV8 391 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 CNTNAP5Q8WYK1 1306 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.672e-13■■□□□ 14.3
DDX41-207ENST00000507900 KIF5BP33176 963 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 NFIAQ12857 509 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 PNMA1Q8ND90 353 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 GMLQ99445 158 aa19.22■□□□□ 0.67
DDX41-207ENST00000507900 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
DDX41-207ENST00000507900 ARFGEF1Q9Y6D6 1849 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 UBE2Q2LH0YL09 131 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 HLA-DOAP06340 250 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 GRM4Q14833 912 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
DDX41-207ENST00000507900 MYSM1Q5VVJ2 828 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 CMTR1Q8N1G2 835 aaKnown RBP19.21■□□□□ 0.67
DDX41-207ENST00000507900 RTEL1Q9NZ71 1219 aa19.21■□□□□ 0.67
DDX41-207ENST00000507900 MMP1P03956 469 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
DDX41-207ENST00000507900 PKN1Q16512 942 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 POLR3EQ9NVU0 708 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 FAM198AQ9UFP1 575 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
DDX41-207ENST00000507900 ATRNL1Q5VV63 1379 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 IGKV6D-41A0A0C4DH26 115 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.66
DDX41-207ENST00000507900 CCDC183Q5T5S1 534 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 GAS2L3Q86XJ1 694 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 NIM1KQ8IY84 436 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 SRBD1Q8N5C6 995 aaKnown RBP19.19■□□□□ 0.66
DDX41-207ENST00000507900 PGBD1Q96JS3 809 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 TMEM47Q9BQJ4 181 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.19■□□□□ 0.66
DDX41-207ENST00000507900 PSMD14O00487 310 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 YEATS4O95619 227 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
DDX41-207ENST00000507900 GNAQP50148 359 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 CFAP100Q494V2 611 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 CCDC82Q8N4S0 544 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 TAOK3Q9H2K8 898 aa19.19■□□□□ 0.66
DDX41-207ENST00000507900 ENTPD3O75355 529 aa19.18■□□□□ 0.66
DDX41-207ENST00000507900 TOP1P11387 765 aaKnown RBP19.18■□□□□ 0.66
DDX41-207ENST00000507900 SHMT1P34896 483 aa19.18■□□□□ 0.66
DDX41-207ENST00000507900 PTGER2P43116 358 aa19.18■□□□□ 0.66
DDX41-207ENST00000507900 CEP95Q96GE4 821 aa19.18■□□□□ 0.66
DDX41-207ENST00000507900 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
DDX41-207ENST00000507900 STX8Q9UNK0 236 aa19.18■□□□□ 0.66
DDX41-207ENST00000507900 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 XBP1P17861 261 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 MRE11P49959 708 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX41-207ENST00000507900 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
DDX41-207ENST00000507900 AGBL3Q8NEM8 1001 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 FTOQ9C0B1 505 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX41-207ENST00000507900 MAD2L2Q9UI95 211 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 HDAC9Q9UKV0 1011 aa19.17■□□□□ 0.66
DDX41-207ENST00000507900 PALM3A6NDB9 673 aaPredicted RBP19.16■□□□□ 0.66
DDX41-207ENST00000507900 GOLGA6L4A6NEF3 574 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 RAD17O75943 681 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 LETM1O95202 739 aaPredicted RBP19.16■□□□□ 0.66
DDX41-207ENST00000507900 LRSAM1Q6UWE0 723 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 ZFPM1Q8IX07 1006 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 LINC00301Q8NCQ3 95 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
DDX41-207ENST00000507900 CCDC17Q96LX7 622 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 LZTS2Q9BRK4 669 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 PI4KBQ9UBF8 816 aa19.16■□□□□ 0.66
DDX41-207ENST00000507900 V9GY48 417 aaPredicted RBP19.16■□□□□ 0.66
DDX41-207ENST00000507900 SYCE3A1L190 88 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 AKR1B1P15121 316 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 NOSTRINQ8IVI9 506 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 DIS3L2Q8IYB7 885 aaKnown RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 MTMR14Q8NCE2 650 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 PHF20Q9BVI0 1012 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 MYH4Q9Y623 1939 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 DDTLA6NHG4 134 aaPredicted RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 NFKBIEO00221 500 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 CACNB3P54284 484 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 CEBPZQ03701 1054 aaKnown RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 GNL2Q13823 731 aaKnown RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 PFKFB3Q16875 520 aaPredicted RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 PPP4R3BQ5MIZ7 849 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 ANO1Q5XXA6 986 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 SH3BP5LQ7L8J4 393 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 TDRD3Q9H7E2 651 aaKnown RBP19.15■□□□□ 0.66
DDX41-207ENST00000507900 DNAJC18Q9H819 358 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 GRPEL1Q9HAV7 217 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 CLIC4Q9Y696 253 aa19.15■□□□□ 0.66
DDX41-207ENST00000507900 SCG2P13521 617 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms