RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 PICK1Q9NRD5 415 aa11.13□□□□□ -0.63
RPS3A-206ENST00000507485 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
RPS3A-206ENST00000507485 GJB1P08034 283 aa11.12□□□□□ -0.63
RPS3A-206ENST00000507485 FLT3LGP49771 235 aa11.12□□□□□ -0.63
RPS3A-206ENST00000507485 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
RPS3A-206ENST00000507485 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
RPS3A-206ENST00000507485 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
RPS3A-206ENST00000507485 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
RPS3A-206ENST00000507485 PEX10O60683 326 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 HOXD10P28358 340 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 FCGRTP55899 365 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
RPS3A-206ENST00000507485 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 SH3RF3Q8TEJ3 882 aaPredicted RBP11.11□□□□□ -0.63
RPS3A-206ENST00000507485 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
RPS3A-206ENST00000507485 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 PLXNB2O15031 1838 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
RPS3A-206ENST00000507485 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
RPS3A-206ENST00000507485 MAST2Q6P0Q8 1798 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 ADCY3O60266 1144 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 RNF40O75150 1001 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 TMEM57Q8N5G2 664 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 U2AF1L4Q8WU68 220 aaKnown RBP11.1□□□□□ -0.63
RPS3A-206ENST00000507485 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
RPS3A-206ENST00000507485 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPS3A-206ENST00000507485 HDAC5Q9UQL6 1122 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
RPS3A-206ENST00000507485 GNAI2P04899 355 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 INHAP05111 366 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 GGCXP38435 758 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 CAP2P40123 477 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 SPP2Q13103 211 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 DBNDD2Q9BQY9 259 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 PRO3102Q9H379 93 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 RAI14Q9P0K7 980 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 TNPO2O14787 897 aaKnown RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 RANBP2P49792 3224 aaKnown RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 HMGCS2P54868 508 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 TRIM32Q13049 653 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 SMCR8Q8TEV9 937 aaPredicted RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 DPF3Q92784 378 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
RPS3A-206ENST00000507485 TLR7Q9NYK1 1049 aaKnown RBP11.09□□□□□ -0.63
RPS3A-206ENST00000507485 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 SGPL1O95470 568 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 UBXN2AP68543 259 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 IRF5Q13568 498 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 PROCA1Q8NCQ7 364 aaPredicted RBP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 NKX2-3Q8TAU0 364 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 PXYLP1Q8TE99 480 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 DIS3LQ8TF46 1054 aaKnown RBP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPS3A-206ENST00000507485 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
RPS3A-206ENST00000507485 LDHCP07864 332 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 RLBP1P12271 317 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 GSTO1P78417 241 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 G3BP1Q13283 466 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPS3A-206ENST00000507485 FAM110CQ1W6H9 321 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 ZNF280CQ8ND82 737 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
RPS3A-206ENST00000507485 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
RPS3A-206ENST00000507485 LRP2BPQ9P2M1 347 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
RPS3A-206ENST00000507485 FLT1P17948 1338 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
RPS3A-206ENST00000507485 UQCRFS1P1P0C7P4 283 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 ZAP70P43403 619 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 DYNLL1P63167 89 aaKnown RBP11.06□□□□□ -0.64
RPS3A-206ENST00000507485 ATP8B2P98198 1209 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 TXNRD2Q9NNW7 524 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
RPS3A-206ENST00000507485 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
RPS3A-206ENST00000507485 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
RPS3A-206ENST00000507485 IPO8O15397 1037 aaKnown RBP11.05□□□□□ -0.64
RPS3A-206ENST00000507485 GDF11O95390 407 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms