RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 GRB14Q14449 540 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 CATSPERGQ6ZRH7 1159 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
SNF8-205ENST00000507302 LPAR1Q92633 364 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 PAGR1Q9BTK6 254 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 DDX20Q9UHI6 824 aaKnown RBP20.18■□□□□ 0.82
SNF8-205ENST00000507302 A0A0G2JMZ2 1700 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 DNM1LO00429 736 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
SNF8-205ENST00000507302 GNAI2P04899 355 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 CCNA1P78396 465 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNF8-205ENST00000507302 MFSD14CQ5VZR4 134 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 EHD4Q9H223 541 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 PRUNE2Q8WUY3 3088 aa20.17■□□□□ 0.82
SNF8-205ENST00000507302 GH2P01242 217 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 POLA2Q14181 598 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 TNNI3KQ59H18 835 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
SNF8-205ENST00000507302 TRPV1Q8NER1 839 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 SENP6Q9GZR1 1112 aaPredicted RBP20.16■□□□□ 0.82
SNF8-205ENST00000507302 SNRKQ9NRH2 765 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 FPGT-TNNI3KV9GXZ4 949 aa20.16■□□□□ 0.82
SNF8-205ENST00000507302 HLA-DOAP06340 250 aa20.15■□□□□ 0.82
SNF8-205ENST00000507302 DBNDD2Q9BQY9 259 aa20.15■□□□□ 0.82
SNF8-205ENST00000507302 BTBD7Q9P203 1132 aa20.15■□□□□ 0.82
SNF8-205ENST00000507302 CYBAP13498 195 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 VCAM1P19320 739 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 USP14P54578 494 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 SNX17Q15036 470 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 CERS3Q8IU89 383 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 NPLOC4Q8TAT6 608 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 LBHD1Q9BQE6 289 aaPredicted RBP20.14■□□□□ 0.81
SNF8-205ENST00000507302 TRIM34Q9BYJ4 488 aa20.14■□□□□ 0.81
SNF8-205ENST00000507302 PIH1D3Q9NQM4 214 aaKnown RBP20.14■□□□□ 0.81
SNF8-205ENST00000507302 TRIM27P14373 513 aa20.13■□□□□ 0.81
SNF8-205ENST00000507302 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
SNF8-205ENST00000507302 CCDC158Q5M9N0 1113 aa20.13■□□□□ 0.81
SNF8-205ENST00000507302 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
SNF8-205ENST00000507302 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
SNF8-205ENST00000507302 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
SNF8-205ENST00000507302 ZAP70P43403 619 aa20.12■□□□□ 0.81
SNF8-205ENST00000507302 RTP1P59025 263 aa20.12■□□□□ 0.81
SNF8-205ENST00000507302 OLFML2BQ68BL8 750 aa20.12■□□□□ 0.81
SNF8-205ENST00000507302 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
SNF8-205ENST00000507302 SSH3Q8TE77 659 aa20.12■□□□□ 0.81
SNF8-205ENST00000507302 SERPINB13Q9UIV8 391 aa20.12■□□□□ 0.81
SNF8-205ENST00000507302 CYP2C19P33261 490 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 GUCY1A2P33402 732 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 ZNF697Q5TEC3 545 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 C1orf53Q5VUE5 145 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 ACER1Q8TDN7 264 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 PARP14Q460N5 1801 aa20.11■□□□□ 0.81
SNF8-205ENST00000507302 SLC39A5Q6ZMH5 540 aa20.1■□□□□ 0.81
SNF8-205ENST00000507302 CDX2Q99626 313 aaPredicted RBP20.1■□□□□ 0.81
SNF8-205ENST00000507302 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
SNF8-205ENST00000507302 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
SNF8-205ENST00000507302 NOP58Q9Y2X3 529 aaKnown RBP20.1■□□□□ 0.81
SNF8-205ENST00000507302 NDUFB9Q9Y6M9 179 aa20.1■□□□□ 0.81
SNF8-205ENST00000507302 STRNO43815 780 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 SHMT1P34896 483 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 ATN1P54259 1190 aaPredicted RBP20.09■□□□□ 0.81
SNF8-205ENST00000507302 GABPAQ06546 454 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 SHHQ15465 462 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
SNF8-205ENST00000507302 ARRDC4Q8NCT1 418 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 FEZ1Q99689 392 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 SEMA6BQ9H3T3 888 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 IVNS1ABPQ9Y6Y0 642 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 TTC28Q96AY4 2481 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 MUC3AQ02505 3323 aa20.09■□□□□ 0.81
SNF8-205ENST00000507302 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
SNF8-205ENST00000507302 CYP7A1P22680 504 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 SMAD3P84022 425 aaKnown RBP20.08■□□□□ 0.81
SNF8-205ENST00000507302 ZYXQ15942 572 aaKnown RBP20.08■□□□□ 0.81
SNF8-205ENST00000507302 ABCB5Q2M3G0 1257 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 C9orf50Q5SZB4 431 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 TTC6Q86TZ1 520 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 SHCBP1Q8NEM2 672 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 RPAP3Q9H6T3 665 aaPredicted RBP20.08■□□□□ 0.81
SNF8-205ENST00000507302 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
SNF8-205ENST00000507302 PRKAG2Q9UGJ0 569 aa20.08■□□□□ 0.81
SNF8-205ENST00000507302 ZNFX1Q9P2E3 1918 aaKnown RBP20.08■□□□□ 0.8
SNF8-205ENST00000507302 NAV1Q8NEY1 1877 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 SEPT4O43236 478 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 CNGA1P29973 690 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 RAB3GAP1Q15042 981 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 FAM161BQ96MY7 647 aa20.07■□□□□ 0.8
SNF8-205ENST00000507302 RIOK1Q9BRS2 568 aaKnown RBP20.07■□□□□ 0.8
SNF8-205ENST00000507302 MOV10L1Q9BXT6 1211 aaKnown RBP20.07■□□□□ 0.8
SNF8-205ENST00000507302 ADORA2AP29274 412 aa20.06■□□□□ 0.8
SNF8-205ENST00000507302 PLCD1P51178 756 aa20.06■□□□□ 0.8
SNF8-205ENST00000507302 COG2Q14746 738 aa20.06■□□□□ 0.8
SNF8-205ENST00000507302 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
SNF8-205ENST00000507302 TTYH1Q9H313 450 aaPredicted RBP20.06■□□□□ 0.8
SNF8-205ENST00000507302 PDLIM7Q9NR12 457 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms