RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 HOMEZQ8IX15 550 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 ELMO3Q96BJ8 720 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 TMEM74Q96NL1 305 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 FAM53CQ9NYF3 392 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 VTI1BQ9UEU0 232 aa6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 ZNF608Q9ULD9 1512 aaPredicted RBP6.64□□□□□ -1.35
HMGCLL1-207ENST00000507223 TMEM265A0A087WTH1 108 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRAMEF27A3QJZ7 478 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 RPL6Q02878 288 aaKnown RBP6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 CAMK2GQ13555 558 aaPredicted RBP6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 TSNAXIP1Q2TAA8 658 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 TMCO4Q5TGY1 634 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 ARHGAP27Q6ZUM4 889 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 KCT2Q8NC54 265 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 MIR1-1HGQ9H1L0 117 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
HMGCLL1-207ENST00000507223 TOP2BQ02880 1626 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 NCANO14594 1321 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRR36Q9H6K5 1346 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 F6X3S4 739 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 TSPAN15O95858 294 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 F13A1P00488 732 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 CST3P01034 146 aaPredicted RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 PF4P02776 101 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 GRK4P32298 578 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 MFAP1P55081 439 aaKnown RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 NKPD1Q17RQ9 610 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 C22orf34Q6ZV56 151 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 SPACA3Q8IXA5 215 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 MRPL41Q8IXM3 137 aaKnown RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 LRRC56Q8IYG6 542 aaPredicted RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 TJP2Q9UDY2 1190 aa6.62□□□□□ -1.35
HMGCLL1-207ENST00000507223 FGD5Q6ZNL6 1462 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRRG2O14669 202 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 HID1Q8IV36 788 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 GATAD2BQ8WXI9 593 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 ABCA5Q8WWZ7 1642 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 SYNJ1O43426 1573 aa6.61□□□□□ -1.35
HMGCLL1-207ENST00000507223 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 GREM1O60565 184 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 ITIH2P19823 946 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 RIN3Q8TB24 985 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 ACSF2Q96CM8 615 aaPredicted RBP6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 PPP1R16BQ96T49 567 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 MRS2Q9HD23 443 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 ABCA10Q8WWZ4 1543 aa6.6□□□□□ -1.35
HMGCLL1-207ENST00000507223 B8ZZF3 427 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 ZSCAN22P10073 491 aaPredicted RBP6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 TMEM201Q5SNT2 666 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 ANKLE2Q86XL3 938 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 PPP1R13LQ8WUF5 828 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 LMCD1Q9NZU5 365 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 CTNND2Q9UQB3 1225 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
HMGCLL1-207ENST00000507223 PRR33A8MZF0 331 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 TRIM26Q12899 539 aaPredicted RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 ZNF326Q5BKZ1 582 aaKnown RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 FYB2Q5VWT5 728 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 SYDE1Q6ZW31 735 aaPredicted RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 CDC37L1Q7L3B6 337 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 FBXO27Q8NI29 283 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 JARID2Q92833 1246 aaPredicted RBP6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 TMEM87BQ96K49 555 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 SNX11Q9Y5W9 270 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 RAD54L2Q9Y4B4 1467 aa6.58□□□□□ -1.36
HMGCLL1-207ENST00000507223 DNAJA2O60884 412 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 ZP2Q05996 745 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 FAM160A1Q05DH4 1040 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 IKZF1Q13422 519 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 FBXL19Q6PCT2 694 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 PRR23BQ6ZRT6 265 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 PICK1Q9NRD5 415 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 GTF2IRD1Q9UHL9 959 aa6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 WRNQ14191 1432 aaPredicted RBP eCLIP6.57□□□□□ -1.36
HMGCLL1-207ENST00000507223 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
HMGCLL1-207ENST00000507223 KRT1P04264 644 aa6.56□□□□□ -1.36
HMGCLL1-207ENST00000507223 PGRP06401 933 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms