RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 GABPAQ06546 454 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 IRF5Q13568 498 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 SBK1Q52WX2 424 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 ANKRD13CQ8N6S4 541 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 MB21D1Q8N884 522 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 PXYLP1Q8TE99 480 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 SDR42E1Q8WUS8 393 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 ZNF333Q96JL9 665 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-206ENST00000507017 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 MKNK2Q9HBH9 465 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 MORF4L1Q9UBU8 362 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 SYNPO2Q9UMS6 1093 aa9.16□□□□□ -0.94
SFXN1-206ENST00000507017 ROBO3Q96MS0 1386 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 HIP1O00291 1037 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 GPAA1O43292 621 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 APPP05067 770 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 SHMT1P34896 483 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 COPB2P35606 906 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 NT5C2P49902 561 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 PLCD1P51178 756 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 HERVK_113P62684 666 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 ICA1Q05084 483 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 PDE4BQ07343 736 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 TREML2Q5T2D2 321 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 C16orf86Q6ZW13 317 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.94
SFXN1-206ENST00000507017 HOXC10Q9NYD6 342 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
SFXN1-206ENST00000507017 USP17L12C9JPN9 530 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 USP17L21D6R901 530 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 ADCY3O60266 1144 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
SFXN1-206ENST00000507017 CDK8P49336 464 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 CCDC84Q86UT8 332 aaPredicted RBP9.14□□□□□ -0.95
SFXN1-206ENST00000507017 STRBPQ96SI9 672 aaKnown RBP9.14□□□□□ -0.95
SFXN1-206ENST00000507017 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 PUS7LQ9H0K6 701 aaKnown RBP9.14□□□□□ -0.95
SFXN1-206ENST00000507017 NAPBQ9H115 298 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 SLC5A4Q9NY91 659 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 STAP2Q9UGK3 403 aa9.14□□□□□ -0.95
SFXN1-206ENST00000507017 MGAMO43451 1857 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
SFXN1-206ENST00000507017 WDR46O15213 610 aaKnown RBP9.13□□□□□ -0.95
SFXN1-206ENST00000507017 HMGCRP04035 888 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 VCAM1P19320 739 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 RGS2P41220 211 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 ERVK-24P63145 666 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 PRKCZQ05513 592 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 SEPT2Q15019 361 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
SFXN1-206ENST00000507017 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 CATSPERGQ6ZRH7 1159 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 SMC5Q8IY18 1101 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 ZNF444Q8N0Y2 327 aaPredicted RBP9.13□□□□□ -0.95
SFXN1-206ENST00000507017 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 TANGO6Q9C0B7 1094 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 ARHGAP39Q9C0H5 1083 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 HELLSQ9NRZ9 838 aa9.13□□□□□ -0.95
SFXN1-206ENST00000507017 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.13□□□□□ -0.95
SFXN1-206ENST00000507017 MINDY4BA8MYZ0 360 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 PRKAB2O43741 272 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 GJB1P08034 283 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
SFXN1-206ENST00000507017 XRCC5P13010 732 aaKnown RBP9.12□□□□□ -0.95
SFXN1-206ENST00000507017 FLT3LGP49771 235 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 PDE1AP54750 535 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
SFXN1-206ENST00000507017 COG2Q14746 738 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 CHD1LQ86WJ1 897 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 SHCBP1Q8NEM2 672 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 APBA2Q99767 749 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 PAGR1Q9BTK6 254 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 HTATIP2Q9BUP3 242 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 RPAP3Q9H6T3 665 aaPredicted RBP9.12□□□□□ -0.95
SFXN1-206ENST00000507017 VCPKMTQ9H867 229 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
SFXN1-206ENST00000507017 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
SFXN1-206ENST00000507017 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 STRNO43815 780 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 SLC25A27O95847 323 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 TSPY3P0CV98 308 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 TSPY8P0CW00 308 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 SLURP2P0DP57 97 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 FDX1P10109 184 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 ZKSCAN1P17029 563 aaPredicted RBP9.11□□□□□ -0.95
SFXN1-206ENST00000507017 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
SFXN1-206ENST00000507017 PRPF38BQ5VTL8 546 aaKnown RBP9.11□□□□□ -0.95
SFXN1-206ENST00000507017 TSHZ3Q63HK5 1081 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms