RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
SFXN1-205ENST00000506963 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 CFHR5Q9BXR6 569 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 ANO2Q9NQ90 1003 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 USP17L10C9JJH3 530 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 CA12O43570 354 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.57
SFXN1-205ENST00000506963 PRDM1O75626 825 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 ALDH1A1P00352 501 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 GRM1Q13255 1194 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 RAB3GAP1Q15042 981 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 CCL15Q16663 113 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 TSGA10IPQ3SY00 556 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 FASTKD5Q7L8L6 764 aaKnown RBP11.52□□□□□ -0.57
SFXN1-205ENST00000506963 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
SFXN1-205ENST00000506963 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 KCNB2Q92953 911 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 MKL1Q969V6 931 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 PTPN18Q99952 460 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 TMX2Q9Y320 296 aa11.52□□□□□ -0.57
SFXN1-205ENST00000506963 TRIM75PA6NK02 468 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
SFXN1-205ENST00000506963 MPHOSPH10O00566 681 aaKnown RBP11.51□□□□□ -0.57
SFXN1-205ENST00000506963 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 USP14P54578 494 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 TFAP4Q01664 338 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 ICA1Q05084 483 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
SFXN1-205ENST00000506963 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 ESR2Q92731 530 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 KRT23Q9C075 422 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 SH2D4AQ9H788 454 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 NEDD4P46934 1319 aa11.51□□□□□ -0.57
SFXN1-205ENST00000506963 CEP350Q5VT06 3117 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 A0A1W2PRG0 241 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 BTBD19C9JJ37 291 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 SLC27A2O14975 620 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
SFXN1-205ENST00000506963 EEF2P13639 858 aaKnown RBP11.5□□□□□ -0.57
SFXN1-205ENST00000506963 HSPA4P34932 840 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 MTMR2Q13614 643 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
SFXN1-205ENST00000506963 RNF20Q5VTR2 975 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 CREB3L3Q68CJ9 461 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 GPAT2Q6NUI2 795 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 STK11IPQ8N1F8 1099 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 ACER1Q8TDN7 264 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 IL17RBQ9NRM6 502 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 MYH4Q9Y623 1939 aa11.5□□□□□ -0.57
SFXN1-205ENST00000506963 E7EWF7 191 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 TTLL1O95922 423 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
SFXN1-205ENST00000506963 HMGCS2P54868 508 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 FAM47AQ5JRC9 791 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 STOX1Q6ZVD7 989 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 ANKS1AQ92625 1134 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 LPAR1Q92633 364 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 TTC14Q96N46 770 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 FEZ1Q99689 392 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 MTA3Q9BTC8 594 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 RNF186Q9NXI6 227 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
SFXN1-205ENST00000506963 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
SFXN1-205ENST00000506963 B4E1Z4 1266 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 KDM4AO75164 1064 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 TRDNQ13061 729 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 RRP12Q5JTH9 1297 aaKnown RBP11.48□□□□□ -0.57
SFXN1-205ENST00000506963 DGKHQ86XP1 1220 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 CLEC10AQ8IUN9 316 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
SFXN1-205ENST00000506963 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 USP26Q9BXU7 913 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 VCPKMTQ9H867 229 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
SFXN1-205ENST00000506963 ZSWIM5Q9P217 1185 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms