RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-205ENST00000506924 INSM2Q96T92 566 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-205ENST00000506924 WDR90Q96KV7 1748 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 MROH5Q6ZUA9 1318 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 MED23Q9ULK4 1368 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 A6NJY4 79 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 GYG1P46976 350 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 EPHA4P54764 986 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 CENPCQ03188 943 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 TNIP1Q15025 636 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 EAPPQ56P03 285 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-205ENST00000506924 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 MXD3Q9BW11 206 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 POLMQ9NP87 494 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-205ENST00000506924 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 JAG2Q9Y219 1238 aa11.75□□□□□ -0.53
CLCN3-205ENST00000506924 TTLL8A6PVC2 850 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 CDK2AP1O14519 115 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 PDE8BO95263 885 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 EPHX2P34913 555 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
CLCN3-205ENST00000506924 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 TLR1Q15399 786 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 TMEM164Q5U3C3 297 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 VGLL2Q8N8G2 317 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 STK32AQ8WU08 396 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-205ENST00000506924 IRS2Q9Y4H2 1338 aa11.74□□□□□ -0.53
CLCN3-205ENST00000506924 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 CTSOP43234 321 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-205ENST00000506924 C1QTNF8P60827 252 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 MTX1Q13505 466 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 UBE4AQ14139 1066 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 WDR44Q5JSH3 913 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-205ENST00000506924 RNF217Q8TC41 542 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
CLCN3-205ENST00000506924 CD209Q9NNX6 404 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
CLCN3-205ENST00000506924 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-205ENST00000506924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
CLCN3-205ENST00000506924 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 CIAO1O76071 339 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 TOMM70O94826 608 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 STAU1O95793 577 aaKnown RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 VIL1P09327 827 aaKnown RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 FOXK2Q01167 660 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 TFCP2Q12800 502 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 ZNF804AQ7Z570 1209 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 GPRC5DQ9NZD1 345 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 SCHIP1Q9P0W5 487 aaPredicted RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
CLCN3-205ENST00000506924 SCN4AP35499 1836 aa11.72□□□□□ -0.53
CLCN3-205ENST00000506924 LCE2BO14633 110 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 SURF6O75683 361 aaKnown RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 PUM3Q15397 648 aaKnown RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 TTLL5Q6EMB2 1281 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 C15orf52Q6ZUT6 534 aaKnown RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 VPS37DQ86XT2 251 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 SSH3Q8TE77 659 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.53
CLCN3-205ENST00000506924 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.53
CLCN3-205ENST00000506924 EGFRP00533 1210 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
CLCN3-205ENST00000506924 SLC5A1P13866 664 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 FGFR2P21802 821 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 ADORA1P30542 326 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 TIMM10P62072 90 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 TBC1D10BQ4KMP7 808 aaPredicted RBP11.7□□□□□ -0.54
CLCN3-205ENST00000506924 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 STAG2Q8N3U4 1231 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
CLCN3-205ENST00000506924 TRPM4Q8TD43 1214 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
CLCN3-205ENST00000506924 SUPT16HQ9Y5B9 1047 aaKnown RBP11.7□□□□□ -0.54
CLCN3-205ENST00000506924 F8W031 263 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 H7C1D1 291 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 FRAT2O75474 233 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-205ENST00000506924 SASH1O94885 1247 aa11.69□□□□□ -0.54
CLCN3-205ENST00000506924 IL1R1P14778 569 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms