RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 ZMYND8Q9ULU4 1186 aaPredicted RBP19.71■□□□□ 0.75
SNX2-205ENST00000506874 COG6Q9Y2V7 657 aa19.71■□□□□ 0.75
SNX2-205ENST00000506874 DDX60LQ5H9U9 1706 aaKnown RBP19.71■□□□□ 0.75
SNX2-205ENST00000506874 MAGEB6P1A0A0J9YX57 407 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L15C9J2P7 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L13C9JLJ4 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L11C9JVI0 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L18D6R9N7 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L22D6RA61 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L17D6RBQ6 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L19D6RCP7 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L20D6RJB6 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
SNX2-205ENST00000506874 XRCC5P13010 732 aaKnown RBP19.7■□□□□ 0.74
SNX2-205ENST00000506874 RGS2P41220 211 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 USP17L24Q0WX57 530 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 CCL14Q16627 93 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 WDR78Q5VTH9 848 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 RIOK1Q9BRS2 568 aaKnown RBP19.7■□□□□ 0.74
SNX2-205ENST00000506874 CABP5Q9NP86 173 aa19.7■□□□□ 0.74
SNX2-205ENST00000506874 NAV1Q8NEY1 1877 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 PDE6AP16499 860 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 SHMT1P34896 483 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 MNX1P50219 401 aaPredicted RBP19.69■□□□□ 0.74
SNX2-205ENST00000506874 USP14P54578 494 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 CACNB2Q08289 660 aaPredicted RBP19.69■□□□□ 0.74
SNX2-205ENST00000506874 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 MORN1Q5T089 497 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 SLC9C2Q5TAH2 1124 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 MAP3K21Q5TCX8 1036 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 C12orf42Q96LP6 360 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 DNAJC2Q99543 621 aaKnown RBP19.69■□□□□ 0.74
SNX2-205ENST00000506874 C11orf49Q9H6J7 331 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 OGDHLQ9ULD0 1010 aa19.69■□□□□ 0.74
SNX2-205ENST00000506874 CNMDO75829 334 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 VCAM1P19320 739 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 CCND3P30281 292 aaPredicted RBP19.68■□□□□ 0.74
SNX2-205ENST00000506874 EVX2Q03828 476 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 TTF1Q15361 905 aaPredicted RBP19.68■□□□□ 0.74
SNX2-205ENST00000506874 CATSPERGQ6ZRH7 1159 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 TRMT44Q8IYL2 757 aaKnown RBP19.68■□□□□ 0.74
SNX2-205ENST00000506874 USP6NLQ92738 828 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 CRNKL1Q9BZJ0 848 aaKnown RBP19.68■□□□□ 0.74
SNX2-205ENST00000506874 DDX19BQ9UMR2 479 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 RABGAP1Q9Y3P9 1069 aa19.68■□□□□ 0.74
SNX2-205ENST00000506874 GOLIM4O00461 696 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 MPHOSPH10O00566 681 aaKnown RBP19.67■□□□□ 0.74
SNX2-205ENST00000506874 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
SNX2-205ENST00000506874 SYN1P17600 705 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 CCNA1P78396 465 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 SEPT2Q15019 361 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 TMED8Q6PL24 325 aaPredicted RBP19.67■□□□□ 0.74
SNX2-205ENST00000506874 CLASRPQ8N2M8 674 aaKnown RBP19.67■□□□□ 0.74
SNX2-205ENST00000506874 APBA2Q99767 749 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 KIAA1683Q9H0B3 1180 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 MCM9Q9NXL9 1143 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
SNX2-205ENST00000506874 GUCY1A2P33402 732 aa19.66■□□□□ 0.74
SNX2-205ENST00000506874 SDR42E1Q8WUS8 393 aa19.66■□□□□ 0.74
SNX2-205ENST00000506874 KIF1BPQ96EK5 621 aa19.66■□□□□ 0.74
SNX2-205ENST00000506874 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
SNX2-205ENST00000506874 RPAP3Q9H6T3 665 aaPredicted RBP19.66■□□□□ 0.74
SNX2-205ENST00000506874 SOX1O00570 391 aaPredicted RBP19.65■□□□□ 0.74
SNX2-205ENST00000506874 GLRX3O76003 335 aaKnown RBP19.65■□□□□ 0.74
SNX2-205ENST00000506874 CYP2D6P10635 497 aa19.65■□□□□ 0.74
SNX2-205ENST00000506874 MAP2K5Q13163 448 aa19.65■□□□□ 0.74
SNX2-205ENST00000506874 LCORLQ8N3X6 602 aa19.65■□□□□ 0.74
SNX2-205ENST00000506874 BTBD7Q9P203 1132 aa19.65■□□□□ 0.74
SNX2-205ENST00000506874 A0A1W2PPC1 479 aa19.64■□□□□ 0.73
SNX2-205ENST00000506874 HMMRO75330 724 aa19.64■□□□□ 0.73
SNX2-205ENST00000506874 GABPAQ06546 454 aa19.64■□□□□ 0.73
SNX2-205ENST00000506874 LRCH3Q96II8 777 aa19.64■□□□□ 0.73
SNX2-205ENST00000506874 PFASO15067 1338 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 SPDYE16A6NNV3 312 aaPredicted RBP19.63■□□□□ 0.73
SNX2-205ENST00000506874 PTPREP23469 700 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 RRP1P56182 461 aaKnown RBP19.63■□□□□ 0.73
SNX2-205ENST00000506874 SLFNL1Q499Z3 407 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 SIRT2Q8IXJ6 389 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 RPAP2Q8IXW5 612 aaPredicted RBP19.63■□□□□ 0.73
SNX2-205ENST00000506874 SLC44A5Q8NCS7 719 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 GDF15Q99988 308 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 ARMT1Q9H993 441 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 ZBTB40Q9NUA8 1239 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 IVNS1ABPQ9Y6Y0 642 aa19.63■□□□□ 0.73
SNX2-205ENST00000506874 A0A1W2PRG0 241 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 TCRBV5S4A2TA0A5A2 114 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 SLC15A5A6NIM6 579 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 LHX8Q68G74 356 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNX2-205ENST00000506874 DYNLL2Q96FJ2 89 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 BOLA2Q9H3K6 86 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
SNX2-205ENST00000506874 MYH8P13535 1937 aa19.62■□□□□ 0.73
SNX2-205ENST00000506874 BAZ2AQ9UIF9 1905 aaKnown RBP19.62■□□□□ 0.73
SNX2-205ENST00000506874 PRKAB2O43741 272 aa19.61■□□□□ 0.73
SNX2-205ENST00000506874 MAGEA10P43363 369 aaPredicted RBP19.61■□□□□ 0.73
SNX2-205ENST00000506874 ATP2B2Q01814 1243 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms