RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
TCOF1-210ENST00000506767 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 NOVP48745 357 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 NOGQ13253 232 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-210ENST00000506767 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 ESR2Q92731 530 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 MS4A4AQ96JQ5 239 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 PTPRFP10586 1907 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 TESPA1A2RU30 521 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-210ENST00000506767 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 B4E1Z4 1266 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 KDM4AO75164 1064 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 SPP2Q13103 211 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
TCOF1-210ENST00000506767 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 NCOA7Q8NI08 942 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 ZIC5Q96T25 663 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 TOMM22Q9NS69 142 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 ZSWIM5Q9P217 1185 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 NYAP2Q9P242 653 aa15.18■□□□□ 0.02
TCOF1-210ENST00000506767 A0A0G2JLL6 359 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-210ENST00000506767 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 AOC2O75106 756 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 EEF2P13639 858 aaKnown RBP15.17■□□□□ 0.02
TCOF1-210ENST00000506767 ZKSCAN1P17029 563 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-210ENST00000506767 MAP2K2P36507 400 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 GTF2A2P52657 109 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 ICA1Q05084 483 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 TRDNQ13061 729 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
TCOF1-210ENST00000506767 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 PRRT2Q7Z6L0 340 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-210ENST00000506767 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 MKL1Q969V6 931 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
TCOF1-210ENST00000506767 MANSC4A6NHS7 340 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-210ENST00000506767 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 C19orf81C9J6K1 198 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 NMT2O60551 498 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 BACE1P56817 501 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 KIF23Q02241 960 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-210ENST00000506767 GRM1Q13255 1194 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 MOGSQ13724 837 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 CYB5R4Q7L1T6 521 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 MB21D2Q8IYB1 491 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-210ENST00000506767 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
TCOF1-210ENST00000506767 TTLL1O95922 423 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 CETPP11597 493 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 TM4SF4P48230 202 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 INHBEP58166 350 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 MTMR2Q13614 643 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 COL9A3Q14050 684 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-210ENST00000506767 KRT32Q14532 448 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 RCSD1Q6JBY9 416 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
TCOF1-210ENST00000506767 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-210ENST00000506767 IL17RAQ96F46 866 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 C12orf42Q96LP6 360 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 TTC14Q96N46 770 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 ARHGEF10LQ9HCE6 1279 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 SYNPO2Q9UMS6 1093 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 LOC285556D6RIA3 1793 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 MYH4Q9Y623 1939 aa15.15■□□□□ 0.02
TCOF1-210ENST00000506767 MCCP23508 829 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 ANTXR2P58335 489 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 CCDC178Q5BJE1 867 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 DGKHQ86XP1 1220 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 BRI3BPQ8WY22 251 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 ANKS1AQ92625 1134 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 PTPN18Q99952 460 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 BACH2Q9BYV9 841 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
TCOF1-210ENST00000506767 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 FOXN1O15353 648 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 USP14P54578 494 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 HMGCS2P54868 508 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 ANAPC15P60006 121 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 SREBF2Q12772 1141 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 DGKZQ13574 1117 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 SEC23AQ15436 765 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 CCL15Q16663 113 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms