RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 EVI5O60447 810 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 CYP2C8P10632 490 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 CYP2D6P10635 497 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 BCRP11274 1271 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 JAG1P78504 1218 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 EVX2Q03828 476 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
TCOF1-209ENST00000506630 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
TCOF1-209ENST00000506630 SEC62Q99442 399 aaKnown RBP15.72■□□□□ 0.11
TCOF1-209ENST00000506630 UNC93B1Q9H1C4 597 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 OSBPL3Q9H4L5 887 aa15.72■□□□□ 0.11
TCOF1-209ENST00000506630 ADCY3O60266 1144 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
TCOF1-209ENST00000506630 NEFLP07196 543 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-209ENST00000506630 PDE4AP27815 886 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 ZMYM1Q5SVZ6 1142 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 GABRQQ9UN88 632 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
TCOF1-209ENST00000506630 CYP2D7A0A087X1C5 515 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 ASNSP08243 561 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 GNAT2P19087 354 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 AS3MTQ9HBK9 375 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
TCOF1-209ENST00000506630 ZBTB21Q9ULJ3 1066 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 MYH4Q9Y623 1939 aa15.7■□□□□ 0.1
TCOF1-209ENST00000506630 A0A0G2JLL6 359 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-209ENST00000506630 GSG1L2A8MUP6 293 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 USP17L21D6R901 530 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 TNPO2O14787 897 aaKnown RBP15.69■□□□□ 0.1
TCOF1-209ENST00000506630 APPP05067 770 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 SHMT1P34896 483 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 TDO2P48775 406 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 FLT3LGP49771 235 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-209ENST00000506630 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 GADL1Q6ZQY3 521 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 CCDC129Q6ZRS4 1044 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 PRRT2Q7Z6L0 340 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-209ENST00000506630 PXYLP1Q8TE99 480 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
TCOF1-209ENST00000506630 TBC1D2Q9BYX2 928 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 MGAMO43451 1857 aa15.69■□□□□ 0.1
TCOF1-209ENST00000506630 GH2P01242 217 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 INHAP05111 366 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 ELNP15502 786 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 GABPAQ06546 454 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 SPP2Q13103 211 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 SLC44A5Q8NCS7 719 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 EPB41L4AQ9HCS5 686 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-209ENST00000506630 GINM1Q9NU53 330 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 GREB1LQ9C091 1923 aaPredicted RBP15.68■□□□□ 0.1
TCOF1-209ENST00000506630 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
TCOF1-209ENST00000506630 MPHOSPH10O00566 681 aaKnown RBP15.67■□□□□ 0.1
TCOF1-209ENST00000506630 IRF5Q13568 498 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 COA7Q96BR5 231 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 FAM227BQ96M60 508 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 TAOK2Q9UL54 1235 aa15.67■□□□□ 0.1
TCOF1-209ENST00000506630 A0A0D9SFI3 127 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
TCOF1-209ENST00000506630 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 NMIQ13287 307 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-209ENST00000506630 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 TREML2Q5T2D2 321 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 CENPQQ7L2Z9 268 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-209ENST00000506630 IFNL3Q8IZI9 196 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
TCOF1-209ENST00000506630 SDSP20132 328 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 CDK8P49336 464 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 HMGCS2P54868 508 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 MTMR2Q13614 643 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 MCMDC2Q4G0Z9 681 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 SBK1Q52WX2 424 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 C16orf86Q6ZW13 317 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 PAWRQ96IZ0 340 aaKnown RBP15.65■□□□□ 0.1
TCOF1-209ENST00000506630 NAPBQ9H115 298 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 PAK6Q9NQU5 681 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-209ENST00000506630 DIAPH3Q9NSV4 1193 aa15.65■□□□□ 0.1
TCOF1-209ENST00000506630 ROBO3Q96MS0 1386 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 SOX1O00570 391 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms