RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 FBRSQ9HAH7 460 aa11.3□□□□□ -0.6
RETREG1-203ENST00000506441 LGR6Q9HBX8 967 aa11.3□□□□□ -0.6
RETREG1-203ENST00000506441 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 H2AFB2P0C5Z0 115 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 CYP7A1P22680 504 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 GSK3AP49840 483 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 ARMCX6Q7L4S7 300 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
RETREG1-203ENST00000506441 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 SHDQ96IW2 340 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 DHRS1Q96LJ7 313 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
RETREG1-203ENST00000506441 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
RETREG1-203ENST00000506441 NME1P15531 152 aaKnown RBP11.28□□□□□ -0.6
RETREG1-203ENST00000506441 PPP2R5EQ16537 467 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 OVOS1Q6IE37 1185 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 C19orf47Q8N9M1 422 aaKnown RBP11.28□□□□□ -0.6
RETREG1-203ENST00000506441 PRDM10Q9NQV6 1147 aa11.28□□□□□ -0.6
RETREG1-203ENST00000506441 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.6
RETREG1-203ENST00000506441 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 GUCY2CP25092 1073 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 ETV3P41162 512 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 NKG7Q16617 165 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 CYB5D2Q8WUJ1 264 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 TBC1D32Q96NH3 1257 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.27□□□□□ -0.61
RETREG1-203ENST00000506441 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 TPSG1Q9NRR2 321 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
RETREG1-203ENST00000506441 PBRM1Q86U86 1689 aa11.27□□□□□ -0.61
RETREG1-203ENST00000506441 NBPF6Q5VWK0 638 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 RNF43Q68DV7 783 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 LSRQ86X29 649 aaPredicted RBP11.26□□□□□ -0.61
RETREG1-203ENST00000506441 COX4I2Q96KJ9 171 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 NBPF4Q96M43 638 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 TRIM55Q9BYV6 548 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
RETREG1-203ENST00000506441 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 TNFRSF10CO14798 259 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 RGS13O14921 159 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 CASP7P55210 303 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 RBL2Q08999 1139 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 DOC2BQ14184 412 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
RETREG1-203ENST00000506441 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
RETREG1-203ENST00000506441 MIPEPQ99797 713 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
RETREG1-203ENST00000506441 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
RETREG1-203ENST00000506441 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
RETREG1-203ENST00000506441 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
RETREG1-203ENST00000506441 HMX2A2RU54 273 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 ETFBP38117 255 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 LETMD1Q6P1Q0 360 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 XAGE3Q8WTP9 111 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 ACTR10Q9NZ32 417 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 GTF2IRD1Q9UHL9 959 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
RETREG1-203ENST00000506441 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
RETREG1-203ENST00000506441 BBS9Q3SYG4 887 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 OGFOD3Q6PK18 319 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 ZAR1Q86SH2 424 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 KIF2CQ99661 725 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 DPH2Q9BQC3 489 aaPredicted RBP11.23□□□□□ -0.61
RETREG1-203ENST00000506441 C1GALT1Q9NS00 363 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 TPX2Q9ULW0 747 aaKnown RBP11.23□□□□□ -0.61
RETREG1-203ENST00000506441 SYNJ2O15056 1496 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
RETREG1-203ENST00000506441 CDK5R2Q13319 367 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 CUL7Q14999 1698 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 SPOCK3Q9BQ16 436 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
RETREG1-203ENST00000506441 EEA1Q15075 1411 aa11.21□□□□□ -0.61
RETREG1-203ENST00000506441 FXNQ16595 210 aa11.21□□□□□ -0.61
RETREG1-203ENST00000506441 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.61
RETREG1-203ENST00000506441 UBE3DQ7Z6J8 389 aa11.21□□□□□ -0.61
RETREG1-203ENST00000506441 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
RETREG1-203ENST00000506441 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
RETREG1-203ENST00000506441 CLEC3AO75596 197 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 FAM87AP0C7U9 286 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 RNF4P78317 190 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 NFIAQ12857 509 aa11.2□□□□□ -0.62
RETREG1-203ENST00000506441 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms