RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 OGDHLQ9ULD0 1010 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 PFASO15067 1338 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 APBB1O00213 710 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 HOXA7P31268 230 aaPredicted RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 BMP8BP34820 402 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 LRRC26Q2I0M4 334 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 ABCB5Q2M3G0 1257 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 CERKLQ49MI3 558 aaPredicted RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 ANO1Q5XXA6 986 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 ITPRIPQ8IWB1 547 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 TRMT2AQ8IZ69 625 aaKnown RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 EDC3Q96F86 508 aaKnown RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 PRDM5Q9NQX1 630 aaPredicted RBP10.06□□□□□ -0.8
SNF8-204ENST00000506104 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 NAV1Q8NEY1 1877 aa10.06□□□□□ -0.8
SNF8-204ENST00000506104 BRCA2P51587 3418 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 RAD21O60216 631 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
SNF8-204ENST00000506104 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 PLS1Q14651 629 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 ZKSCAN2Q63HK3 967 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 DPP9Q86TI2 863 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 TLR7Q9NYK1 1049 aaKnown RBP10.05□□□□□ -0.8
SNF8-204ENST00000506104 ATP11BQ9Y2G3 1177 aa10.05□□□□□ -0.8
SNF8-204ENST00000506104 ZNFX1Q9P2E3 1918 aaKnown RBP10.04□□□□□ -0.8
SNF8-204ENST00000506104 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
SNF8-204ENST00000506104 CYP2C19P33261 490 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 USP14P54578 494 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 PPP4CP60510 307 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 MORN1Q5T089 497 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
SNF8-204ENST00000506104 TTC6Q86TZ1 520 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 ACER1Q8TDN7 264 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
SNF8-204ENST00000506104 SERPINB13Q9UIV8 391 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
SNF8-204ENST00000506104 SLC15A5A6NIM6 579 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 MAP3K21Q5TCX8 1036 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 AACSQ86V21 672 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 NPLOC4Q8TAT6 608 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 GINM1Q9NU53 330 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 MTMR10Q9NXD2 777 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 FLRT1Q9NZU1 646 aa10.03□□□□□ -0.8
SNF8-204ENST00000506104 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
SNF8-204ENST00000506104 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
SNF8-204ENST00000506104 BAZ2AQ9UIF9 1905 aaKnown RBP10.02□□□□□ -0.81
SNF8-204ENST00000506104 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 KBTBD13C9JR72 458 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 CNMDO75829 334 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 VCAM1P19320 739 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 PTPREP23469 700 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 RTP1P59025 263 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 SEPT2Q15019 361 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 LRIT3Q3SXY7 679 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 LHX8Q68G74 356 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 NCAPG2Q86XI2 1143 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 FERMT2Q96AC1 680 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 DNAJC2Q99543 621 aaKnown RBP10.02□□□□□ -0.81
SNF8-204ENST00000506104 IL1RAPL2Q9NP60 686 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 GPR108Q9NPR9 543 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 EXOC6BQ9Y2D4 811 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
SNF8-204ENST00000506104 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 POLA2Q14181 598 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 SSH3Q8TE77 659 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 USP6NLQ92738 828 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 EAF2Q96CJ1 260 aaPredicted RBP10.01□□□□□ -0.81
SNF8-204ENST00000506104 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
SNF8-204ENST00000506104 SMCHD1A6NHR9 2005 aa10□□□□□ -0.81
SNF8-204ENST00000506104 COL11A1P12107 1806 aaPredicted RBP10□□□□□ -0.81
SNF8-204ENST00000506104 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
SNF8-204ENST00000506104 MSCO60682 206 aa10□□□□□ -0.81
SNF8-204ENST00000506104 COL6A1P12109 1028 aa10□□□□□ -0.81
SNF8-204ENST00000506104 ADORA2AP29274 412 aa10□□□□□ -0.81
SNF8-204ENST00000506104 PLCD1P51178 756 aa10□□□□□ -0.81
SNF8-204ENST00000506104 PRAMEF19Q5SWL8 479 aa10□□□□□ -0.81
SNF8-204ENST00000506104 SLC9C2Q5TAH2 1124 aa10□□□□□ -0.81
SNF8-204ENST00000506104 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
SNF8-204ENST00000506104 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
SNF8-204ENST00000506104 SPICE1Q8N0Z3 855 aa10□□□□□ -0.81
SNF8-204ENST00000506104 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms