RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 USP17L20D6RJB6 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 POLR3DP05423 398 aaPredicted RBP13.81□□□□□ -0.2
SIL1-208ENST00000505945 SHMT1P34896 483 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
SIL1-208ENST00000505945 EVX2Q03828 476 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L24Q0WX57 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 CCL14Q16627 93 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 TMED8Q6PL24 325 aaPredicted RBP13.81□□□□□ -0.2
SIL1-208ENST00000505945 GPR142Q7Z601 462 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 GTF3C2Q8WUA4 911 aaPredicted RBP13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP6NLQ92738 828 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 NBPF3Q9H094 633 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 KIAA1683Q9H0B3 1180 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 CNMDO75829 334 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 PDE6AP16499 860 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
SIL1-208ENST00000505945 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
SIL1-208ENST00000505945 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
SIL1-208ENST00000505945 MORN1Q5T089 497 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 C7orf61Q8IZ16 206 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 CLASRPQ8N2M8 674 aaKnown RBP13.8□□□□□ -0.2
SIL1-208ENST00000505945 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
SIL1-208ENST00000505945 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 ALPK3Q96L96 1907 aa13.8□□□□□ -0.2
SIL1-208ENST00000505945 GOLIM4O00461 696 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 VCAM1P19320 739 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 RGS2P41220 211 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 USP14P54578 494 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 SEPT2Q15019 361 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 RPAP2Q8IXW5 612 aaPredicted RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
SIL1-208ENST00000505945 C11orf49Q9H6J7 331 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 ZNF532Q9HCE3 1301 aa13.79□□□□□ -0.2
SIL1-208ENST00000505945 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
SIL1-208ENST00000505945 MS4A1P11836 297 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 CCNA1P78396 465 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 GABPAQ06546 454 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 WDR78Q5VTH9 848 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 SDR42E1Q8WUS8 393 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 RPAP3Q9H6T3 665 aaPredicted RBP13.78□□□□□ -0.2
SIL1-208ENST00000505945 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 BTBD7Q9P203 1132 aa13.78□□□□□ -0.2
SIL1-208ENST00000505945 ZMYND8Q9ULU4 1186 aaPredicted RBP13.78□□□□□ -0.2
SIL1-208ENST00000505945 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 TCRBV5S4A2TA0A5A2 114 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 MPHOSPH10O00566 681 aaKnown RBP13.77□□□□□ -0.21
SIL1-208ENST00000505945 HMMRO75330 724 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
SIL1-208ENST00000505945 CYP2D6P10635 497 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 SYN1P17600 705 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 LHX8Q68G74 356 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 LCORLQ8N3X6 602 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.77□□□□□ -0.21
SIL1-208ENST00000505945 APBA2Q99767 749 aa13.77□□□□□ -0.21
SIL1-208ENST00000505945 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
SIL1-208ENST00000505945 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
SIL1-208ENST00000505945 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 PFASO15067 1338 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 A0A1W2PPC1 479 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
SIL1-208ENST00000505945 PTPREP23469 700 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 GDF15Q99988 308 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 BOLA2Q9H3K6 86 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 ARMT1Q9H993 441 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
SIL1-208ENST00000505945 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
SIL1-208ENST00000505945 PRKAB2O43741 272 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 RAB11FIP3O75154 756 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
SIL1-208ENST00000505945 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 CHGBP05060 677 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 COL6A1P12109 1028 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 ATP5JP18859 108 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 BMP8BP34820 402 aa13.74□□□□□ -0.21
SIL1-208ENST00000505945 ADD2P35612 726 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms