RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 HMX1Q9NP08 348 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 PTPRFP10586 1907 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 SIPA1L1O43166 1804 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 CYP2B6P20813 491 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 CCNA1P78396 465 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 GABPAQ06546 454 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 Q3C1V9 767 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 CATSPERGQ6ZRH7 1159 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 LCORLQ8N3X6 602 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 SDR42E1Q8WUS8 393 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 HAUS7Q99871 368 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 LRRCC1Q9C099 1032 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 DCP1AQ9NPI6 582 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 SWAP70Q9UH65 585 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
PDLIM7-214ENST00000505746 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 PEX10O60683 326 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 GLRX3O76003 335 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ADD2P35612 726 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ZSCAN25Q6NSZ9 544 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 PLEKHH3Q7Z736 793 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ANKLE1Q8NAG6 615 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ACER1Q8TDN7 264 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ARMT1Q9H993 441 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ATP8A2Q9NTI2 1148 aa14.56□□□□□ -0.08
PDLIM7-214ENST00000505746 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 VCAM1P19320 739 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 RGS2P41220 211 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 SEPT2Q15019 361 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 UBE3CQ15386 1083 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 GPR142Q7Z601 462 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 NECAB2Q7Z6G3 386 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 AMOTL1Q8IY63 956 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 TRIB2Q92519 343 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 PORCNQ9H237 461 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 MGAMO43451 1857 aa14.55□□□□□ -0.08
PDLIM7-214ENST00000505746 EVI5O60447 810 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 MBD4O95243 580 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 ZKSCAN1P17029 563 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 GUCY1A2P33402 732 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 TRIM32Q13049 653 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 POTEEQ6S8J3 1075 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 LBX2Q6XYB7 198 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 TMEM179Q6ZVK1 233 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 USP6NLQ92738 828 aa14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 PAWRQ96IZ0 340 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 RPAP3Q9H6T3 665 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-214ENST00000505746 PRKAB2O43741 272 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 CNMDO75829 334 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 MORN1Q5T089 497 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 MAP3K21Q5TCX8 1036 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 HOXC10Q9NYD6 342 aa14.53□□□□□ -0.08
PDLIM7-214ENST00000505746 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.08
PDLIM7-214ENST00000505746 A0A1W2PRG0 241 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 CYP2D6P10635 497 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 EVX2Q03828 476 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 COG2Q14746 738 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 C12orf60Q5U649 245 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 DYNLL2Q96FJ2 89 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 GPATCH3Q96I76 525 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 CCDC17Q96LX7 622 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 APBA2Q99767 749 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 NBPF3Q9H094 633 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 SH2D4AQ9H788 454 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 ECHDC1Q9NTX5 307 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.09
PDLIM7-214ENST00000505746 SLC15A5A6NIM6 579 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 SMARCA5O60264 1052 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 PTPREP23469 700 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 CACNB2Q08289 660 aaPredicted RBP14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 SLFNL1Q499Z3 407 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 LPAR1Q92633 364 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 ARHGEF10LQ9HCE6 1279 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 BTBD7Q9P203 1132 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 SLC4A4Q9Y6R1 1079 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 IVNS1ABPQ9Y6Y0 642 aa14.51□□□□□ -0.09
PDLIM7-214ENST00000505746 USP17L12C9JPN9 530 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 USP17L21D6R901 530 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 CDK8P49336 464 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 ICA1Q05084 483 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 CCL14Q16627 93 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 MFSD14CQ5VZR4 134 aa14.5□□□□□ -0.09
PDLIM7-214ENST00000505746 DIS3LQ8TF46 1054 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms