RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MYLIPQ8WY64 445 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 FAM84BQ96KN1 310 aaPredicted RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 ZDHHC15Q96MV8 337 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 TTYH1Q9H313 450 aaPredicted RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 SLC45A1Q9Y2W3 748 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 AXIN1O15169 862 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 HIBADHP31937 336 aaKnown RBP8.91□□□□□ -0.98
VCAN-206ENST00000505615 GCGRP47871 477 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 FOXO4P98177 505 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 MAP3K21Q5TCX8 1036 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 BRICD5Q6PL45 260 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 G2E3Q7L622 706 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 CYP4X1Q8N118 509 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 TSPYL6Q8N831 410 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 TEKT1Q969V4 418 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 ZNF594Q96JF6 807 aaPredicted RBP8.91□□□□□ -0.98
VCAN-206ENST00000505615 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 IFT57Q9NWB7 429 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 TMOD2Q9NZR1 351 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 GJD2Q9UKL4 321 aa8.91□□□□□ -0.98
VCAN-206ENST00000505615 ATAD5Q96QE3 1844 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 PLIN1O60240 522 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.98
VCAN-206ENST00000505615 IFIT5Q13325 482 aaKnown RBP8.9□□□□□ -0.98
VCAN-206ENST00000505615 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 FAM110CQ1W6H9 321 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 ANKRD13CQ8N6S4 541 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 USP38Q8NB14 1042 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 FAM151AQ8WW52 585 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 TRIB2Q92519 343 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 COA7Q96BR5 231 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 RUNDC1Q96C34 613 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 FAM122AQ96E09 287 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 MRIQ9BWK5 157 aa8.9□□□□□ -0.98
VCAN-206ENST00000505615 HMX1Q9NP08 348 aaPredicted RBP8.9□□□□□ -0.98
VCAN-206ENST00000505615 DDX11L8A8MPP1 907 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 CHAF1AQ13111 956 aaPredicted RBP8.89□□□□□ -0.99
VCAN-206ENST00000505615 EPHA10Q5JZY3 1008 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 GADL1Q6ZQY3 521 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 FASTKD5Q7L8L6 764 aaKnown RBP8.89□□□□□ -0.99
VCAN-206ENST00000505615 FBXO33Q7Z6M2 555 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
VCAN-206ENST00000505615 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 MYH2Q9UKX2 1941 aa8.89□□□□□ -0.99
VCAN-206ENST00000505615 TCF20Q9UGU0 1960 aaKnown RBP8.88□□□□□ -0.99
VCAN-206ENST00000505615 WFS1O76024 890 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 FOSL2P15408 326 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 PTPRAP18433 802 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 GNAI1P63096 354 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 NFIAQ12857 509 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 C9orf50Q5SZB4 431 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 HHIPL2Q6UWX4 724 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 LDHAL6AQ6ZMR3 332 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 SMCR8Q8TEV9 937 aaPredicted RBP8.88□□□□□ -0.99
VCAN-206ENST00000505615 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 NLRP7Q8WX94 980 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 ZHX2Q9Y6X8 837 aa8.88□□□□□ -0.99
VCAN-206ENST00000505615 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 MAST3O60307 1309 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 WNT7AO00755 349 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 TCP10Q12799 353 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 SHHQ15465 462 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 TREML2Q5T2D2 321 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 LMBR1LQ6UX01 489 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 LINS1Q8NG48 757 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 MYH16Q9H6N6 1097 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 CNNM1Q9NRU3 951 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.87□□□□□ -0.99
VCAN-206ENST00000505615 AGTPBP1Q9UPW5 1226 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
VCAN-206ENST00000505615 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 CHD7Q9P2D1 2997 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 REV3LO60673 3130 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 WIPF1O43516 503 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 SMPD1P17405 629 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 SMAD3P84022 425 aaKnown RBP8.86□□□□□ -0.99
VCAN-206ENST00000505615 MAP3K12Q12852 859 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 CDC42EP5Q6NZY7 148 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 CCDC84Q86UT8 332 aaPredicted RBP8.86□□□□□ -0.99
VCAN-206ENST00000505615 ZFPM1Q8IX07 1006 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
VCAN-206ENST00000505615 DNAAF4Q8WXU2 420 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 PUS3Q9BZE2 481 aaKnown RBP8.86□□□□□ -0.99
VCAN-206ENST00000505615 SUGT1Q9Y2Z0 365 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 DAGLAQ9Y4D2 1042 aa8.86□□□□□ -0.99
VCAN-206ENST00000505615 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 BRWD1Q9NSI6 2320 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 CCND3P30281 292 aaPredicted RBP8.85□□□□□ -0.99
VCAN-206ENST00000505615 MMP16P51512 607 aa8.85□□□□□ -0.99
VCAN-206ENST00000505615 CACNB2Q08289 660 aaPredicted RBP8.85□□□□□ -0.99
VCAN-206ENST00000505615 FLIIQ13045 1269 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms