RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
DDR1-257ENST00000505534 MDM2Q00987 491 aaPredicted RBP20.64■□□□□ 0.89
DDR1-257ENST00000505534 TATDN1Q6P1N9 297 aa20.64■□□□□ 0.89
DDR1-257ENST00000505534 CNMDO75829 334 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 ZAP70P43403 619 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 USP14P54578 494 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 DYNLL1P63167 89 aaKnown RBP20.63■□□□□ 0.89
DDR1-257ENST00000505534 POLA2Q14181 598 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 CERS3Q8IU89 383 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 FEZ1Q99689 392 aa20.63■□□□□ 0.89
DDR1-257ENST00000505534 SLC15A5A6NIM6 579 aa20.62■□□□□ 0.89
DDR1-257ENST00000505534 MSCO60682 206 aa20.62■□□□□ 0.89
DDR1-257ENST00000505534 CYP7A1P22680 504 aa20.62■□□□□ 0.89
DDR1-257ENST00000505534 OS9Q13438 667 aaPredicted RBP20.62■□□□□ 0.89
DDR1-257ENST00000505534 FAM109BQ6ICB4 259 aaPredicted RBP20.62■□□□□ 0.89
DDR1-257ENST00000505534 CATSPERGQ6ZRH7 1159 aa20.62■□□□□ 0.89
DDR1-257ENST00000505534 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
DDR1-257ENST00000505534 UNC80Q8N2C7 3258 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 PTPREP23469 700 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 ZYXQ15942 572 aaKnown RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 LBX2Q6XYB7 198 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 FRAT1Q92837 279 aaPredicted RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 LBHD1Q9BQE6 289 aaPredicted RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 KIAA1683Q9H0B3 1180 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 EHD4Q9H223 541 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 PIH1D3Q9NQM4 214 aaKnown RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 FLRT1Q9NZU1 646 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 DDX20Q9UHI6 824 aaKnown RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 TNNQ9UQP3 1299 aa20.61■□□□□ 0.89
DDR1-257ENST00000505534 LAMA2P24043 3122 aaKnown RBP20.61■□□□□ 0.89
DDR1-257ENST00000505534 HOXC6P09630 235 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 USP5P45974 858 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 ATP8B2P98198 1209 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 WDR78Q5VTH9 848 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 LPAR1Q92633 364 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 SERPINB13Q9UIV8 391 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 NDUFB9Q9Y6M9 179 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 IVNS1ABPQ9Y6Y0 642 aa20.6■□□□□ 0.89
DDR1-257ENST00000505534 SURF6O75683 361 aaKnown RBP20.59■□□□□ 0.89
DDR1-257ENST00000505534 GRB14Q14449 540 aa20.59■□□□□ 0.89
DDR1-257ENST00000505534 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
DDR1-257ENST00000505534 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
DDR1-257ENST00000505534 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
DDR1-257ENST00000505534 CLUAP1Q96AJ1 413 aa20.59■□□□□ 0.89
DDR1-257ENST00000505534 RLFQ13129 1914 aa20.59■□□□□ 0.89
DDR1-257ENST00000505534 DNM1LO00429 736 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 IDH1O75874 414 aaKnown RBP20.58■□□□□ 0.89
DDR1-257ENST00000505534 VCAM1P19320 739 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 CNGA1P29973 690 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 CABP5Q9NP86 173 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 BTBD7Q9P203 1132 aa20.58■□□□□ 0.89
DDR1-257ENST00000505534 DBNLQ9UJU6 430 aaKnown RBP20.58■□□□□ 0.89
DDR1-257ENST00000505534 BCAR3O75815 825 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
DDR1-257ENST00000505534 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 MIGA1Q8NAN2 632 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 NPLOC4Q8TAT6 608 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 ACER1Q8TDN7 264 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 PRKAG2Q9UGJ0 569 aa20.57■□□□□ 0.88
DDR1-257ENST00000505534 NOP58Q9Y2X3 529 aaKnown RBP20.57■□□□□ 0.88
DDR1-257ENST00000505534 ATN1P54259 1190 aaPredicted RBP20.56■□□□□ 0.88
DDR1-257ENST00000505534 MAGEB6Q8N7X4 407 aa20.56■□□□□ 0.88
DDR1-257ENST00000505534 GUCD1Q96NT3 240 aa20.56■□□□□ 0.88
DDR1-257ENST00000505534 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
DDR1-257ENST00000505534 LTBP2Q14767 1821 aa20.55■□□□□ 0.88
DDR1-257ENST00000505534 ZNFX1Q9P2E3 1918 aaKnown RBP20.55■□□□□ 0.88
DDR1-257ENST00000505534 SPDYE16A6NNV3 312 aaPredicted RBP20.55■□□□□ 0.88
DDR1-257ENST00000505534 IGHA2P01877 340 aa20.55■□□□□ 0.88
DDR1-257ENST00000505534 CYP2C19P33261 490 aa20.55■□□□□ 0.88
DDR1-257ENST00000505534 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.55■□□□□ 0.88
DDR1-257ENST00000505534 COL25A1Q9BXS0 654 aaPredicted RBP20.55■□□□□ 0.88
DDR1-257ENST00000505534 CCDC8Q9H0W5 538 aaPredicted RBP20.55■□□□□ 0.88
DDR1-257ENST00000505534 RTP1P59025 263 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 DPP9Q86TI2 863 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 ARRDC4Q8NCT1 418 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 TRPV1Q8NER1 839 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 EAF2Q96CJ1 260 aaPredicted RBP20.54■□□□□ 0.88
DDR1-257ENST00000505534 TLR7Q9NYK1 1049 aaKnown RBP20.54■□□□□ 0.88
DDR1-257ENST00000505534 ZNF236Q9UL36 1845 aa20.54■□□□□ 0.88
DDR1-257ENST00000505534 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 STRNO43815 780 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 CYBAP13498 195 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 SHMT1P34896 483 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 PLCD1P51178 756 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 COG2Q14746 738 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 ZKSCAN2Q63HK3 967 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 OLFML2BQ68BL8 750 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 HOXC10Q9NYD6 342 aa20.53■□□□□ 0.88
DDR1-257ENST00000505534 GUCY1A2P33402 732 aa20.52■□□□□ 0.88
DDR1-257ENST00000505534 ZNF697Q5TEC3 545 aa20.52■□□□□ 0.88
DDR1-257ENST00000505534 SLC39A5Q6ZMH5 540 aa20.52■□□□□ 0.88
DDR1-257ENST00000505534 FAM161BQ96MY7 647 aa20.52■□□□□ 0.88
DDR1-257ENST00000505534 NAV1Q8NEY1 1877 aa20.52■□□□□ 0.87
DDR1-257ENST00000505534 KBTBD13C9JR72 458 aa20.51■□□□□ 0.87
DDR1-257ENST00000505534 POLR3DP05423 398 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms