RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 C12orf42Q96LP6 360 aa11.7□□□□□ -0.54
NR1I3-220ENST00000505005 GOPCQ9HD26 462 aa11.7□□□□□ -0.54
NR1I3-220ENST00000505005 HOXC10Q9NYD6 342 aa11.7□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 M0R2C6 588 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
NR1I3-220ENST00000505005 ZNF213O14771 459 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 TSPY3P0CV98 308 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 TSPY8P0CW00 308 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 FDX1P10109 184 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 PPARAQ07869 468 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 IMMTQ16891 758 aaKnown RBP11.69□□□□□ -0.54
NR1I3-220ENST00000505005 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
NR1I3-220ENST00000505005 CTU1Q7Z7A3 348 aaKnown RBP11.69□□□□□ -0.54
NR1I3-220ENST00000505005 ZIC5Q96T25 663 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
NR1I3-220ENST00000505005 GDF11O95390 407 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
NR1I3-220ENST00000505005 CCNA1P78396 465 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 ICA1Q05084 483 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-220ENST00000505005 CRHR2Q13324 411 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 MFSD6Q6ZSS7 791 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 PTPN18Q99952 460 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 DNAJC18Q9H819 358 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
NR1I3-220ENST00000505005 MYPNQ86TC9 1320 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 BAZ2AQ9UIF9 1905 aaKnown RBP11.67□□□□□ -0.54
NR1I3-220ENST00000505005 TSPY2A6NKD2 308 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 FAM196BA6NMK8 535 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 ORC4O43929 436 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 TTLL1O95922 423 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 FGAP02671 866 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 HMGCS2P54868 508 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 TRDNQ13061 729 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 MTMR2Q13614 643 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 NBPF11Q86T75 865 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
NR1I3-220ENST00000505005 TNS4Q8IZW8 715 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 FAM43AQ8N2R8 423 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 ZNF296Q8WUU4 475 aaPredicted RBP11.67□□□□□ -0.54
NR1I3-220ENST00000505005 TTC14Q96N46 770 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 KRT23Q9C075 422 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 PNMA2Q9UL42 364 aa11.67□□□□□ -0.54
NR1I3-220ENST00000505005 DDX60LQ5H9U9 1706 aaKnown RBP11.66□□□□□ -0.54
NR1I3-220ENST00000505005 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
NR1I3-220ENST00000505005 FGRP09769 529 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 COPB2P35606 906 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 RCSD1Q6JBY9 416 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 C17orf99Q6UX52 265 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 IQCA1Q86XH1 822 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 ESR2Q92731 530 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 MKL1Q969V6 931 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
NR1I3-220ENST00000505005 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 TCP11L1Q9NUJ3 509 aa11.66□□□□□ -0.54
NR1I3-220ENST00000505005 A0A0D9SFI3 127 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 EPB41L2O43491 1005 aaKnown RBP11.65□□□□□ -0.54
NR1I3-220ENST00000505005 CHMLP26374 656 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 PDE4AP27815 886 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 FCGRTP55899 365 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 COG2Q14746 738 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 SEPT2Q15019 361 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 AKNAD1Q5T1N1 836 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 GPAT2Q6NUI2 795 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 FBXO46Q6PJ61 603 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-220ENST00000505005 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 COA7Q96BR5 231 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
NR1I3-220ENST00000505005 PLIN4Q96Q06 1357 aa11.65□□□□□ -0.55
NR1I3-220ENST00000505005 SIPA1L1O43166 1804 aa11.65□□□□□ -0.55
NR1I3-220ENST00000505005 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.55
NR1I3-220ENST00000505005 RASA1P20936 1047 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 TFAP4Q01664 338 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 DGKZQ13574 1117 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 MOGSQ13724 837 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
NR1I3-220ENST00000505005 SLC4A8Q2Y0W8 1093 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
NR1I3-220ENST00000505005 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
NR1I3-220ENST00000505005 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms