RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 GLRX3O76003 335 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 UQCRFS1P1P0C7P4 283 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 PLCG2P16885 1265 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 CYP2C19P33261 490 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 CCNA1P78396 465 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 ATP2B2Q01814 1243 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 TTC39AQ5SRH9 613 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 GJC2Q5T442 439 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 ADGRA1Q86SQ6 560 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 MYLIPQ8WY64 445 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 EDC3Q96F86 508 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 CDX2Q99626 313 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
NPIPB3-203ENST00000504841 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 DNM1LO00429 736 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 MSCO60682 206 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 CNMDO75829 334 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 GNAI3P08754 354 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 G3BP1Q13283 466 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 OS9Q13438 667 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 RAB3GAP1Q15042 981 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 SHHQ15465 462 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 C9orf50Q5SZB4 431 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 FAM109BQ6ICB4 259 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 ATF7IPQ6VMQ6 1270 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 FOXP4Q8IVH2 680 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 NPLOC4Q8TAT6 608 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 LPAR1Q92633 364 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 ZBTB47Q9UFB7 747 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 RABGAP1Q9Y3P9 1069 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 CDK5RAP2Q96SN8 1893 aa8.45□□□□□ -1.06
NPIPB3-203ENST00000504841 PNMA6EA0A0J9YXQ4 647 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 SLC15A5A6NIM6 579 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 HAX1O00165 279 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 VCAM1P19320 739 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 CYP7A1P22680 504 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 PTPREP23469 700 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP5P45974 858 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 TRIM60Q495X7 471 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 MIGA1Q8NAN2 632 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 TRPV1Q8NER1 839 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 BADQ92934 168 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 PIH1D3Q9NQM4 214 aaKnown RBP8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 GINM1Q9NU53 330 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 BTBD7Q9P203 1132 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 COL6A3P12111 3177 aa8.44□□□□□ -1.06
NPIPB3-203ENST00000504841 SPDYE16A6NNV3 312 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 KBTBD13C9JR72 458 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 CYBAP13498 195 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 FOSL2P15408 326 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 ZAP70P43403 619 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 PPP4CP60510 307 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 MTX1Q13505 466 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 GRB14Q14449 540 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 DPP9Q86TI2 863 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 FERMT2Q96AC1 680 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 SEMA6BQ9H3T3 888 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 RPAP3Q9H6T3 665 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 FOCADQ5VW36 1801 aa8.43□□□□□ -1.06
NPIPB3-203ENST00000504841 GNAI2P04899 355 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 HOXC6P09630 235 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 ADORA2AP29274 412 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 USP14P54578 494 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 PLS1Q14651 629 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 ABCB5Q2M3G0 1257 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 CERKLQ49MI3 558 aaPredicted RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 FAM47AQ5JRC9 791 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 SLC39A5Q6ZMH5 540 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 SH3RF1Q7Z6J0 888 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 METTL16Q86W50 562 aaKnown RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 RNPC3Q96LT9 517 aaKnown RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 KIAA1683Q9H0B3 1180 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 TTYH1Q9H313 450 aaPredicted RBP8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 CABP5Q9NP86 173 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 PDLIM7Q9NR12 457 aa8.42□□□□□ -1.06
NPIPB3-203ENST00000504841 SERPINB13Q9UIV8 391 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms