RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
CDH6-202ENST00000504835 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
CDH6-202ENST00000504835 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
CDH6-202ENST00000504835 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
CDH6-202ENST00000504835 CEP126Q9P2H0 1117 aa10.57□□□□□ -0.72
CDH6-202ENST00000504835 DENND2AQ9ULE3 1009 aa10.57□□□□□ -0.72
CDH6-202ENST00000504835 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
CDH6-202ENST00000504835 ENTPD3O75355 529 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 GJB1P08034 283 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 PTPRAP18433 802 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 IL15P40933 162 aaPredicted RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 RASGRF1Q13972 1273 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 COPRSQ9NQ92 184 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 ZHX2Q9Y6X8 837 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 DDX60LQ5H9U9 1706 aaKnown RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 HOXD10P28358 340 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 FCGRTP55899 365 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 TIMM10P62072 90 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 MEIS3Q99687 375 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 UNC93B1Q9H1C4 597 aa10.56□□□□□ -0.72
CDH6-202ENST00000504835 GNL3LQ9NVN8 582 aaKnown RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 NOB1Q9ULX3 412 aaKnown RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
CDH6-202ENST00000504835 MYH1P12882 1939 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 BTDP43251 543 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 RHBDL3P58872 404 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 GADL1Q6ZQY3 521 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
CDH6-202ENST00000504835 FAM196BA6NMK8 535 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 TLL1O43897 1013 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 ELNP15502 786 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 DNAJB2P25686 324 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 FLT3LGP49771 235 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 PICALMQ13492 652 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
CDH6-202ENST00000504835 DZIP1Q86YF9 867 aaKnown RBP10.54□□□□□ -0.72
CDH6-202ENST00000504835 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
CDH6-202ENST00000504835 DPF3Q92784 378 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 XAGE2Q96GT9 111 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 ABCF2Q9UG63 623 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
CDH6-202ENST00000504835 GPR75-ASB3A0A0A6YYF3 556 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 A0A1B0GUL7 405 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 S1PR4O95977 384 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 UBXN2AP68543 259 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 TFCP2Q12800 502 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 RRP1BQ14684 758 aaKnown RBP10.53□□□□□ -0.72
CDH6-202ENST00000504835 TREML2Q5T2D2 321 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 PI16Q6UXB8 463 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
CDH6-202ENST00000504835 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
CDH6-202ENST00000504835 PICK1Q9NRD5 415 aa10.53□□□□□ -0.72
CDH6-202ENST00000504835 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
CDH6-202ENST00000504835 COL2A1P02458 1487 aaPredicted RBP10.53□□□□□ -0.72
CDH6-202ENST00000504835 TRIM75PA6NK02 468 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 TNFRSF10AO00220 468 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.72
CDH6-202ENST00000504835 ADCY3O60266 1144 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 GDF9O60383 454 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.72
CDH6-202ENST00000504835 FARP2O94887 1054 aaPredicted RBP10.52□□□□□ -0.72
CDH6-202ENST00000504835 SGPL1O95470 568 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 INHAP05111 366 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 MECOMQ03112 1051 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 API5Q9BZZ5 524 aaKnown RBP10.52□□□□□ -0.72
CDH6-202ENST00000504835 HMG20BQ9P0W2 317 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.72
CDH6-202ENST00000504835 ACTN4O43707 911 aaKnown RBP10.52□□□□□ -0.73
CDH6-202ENST00000504835 MTX1Q13505 466 aa10.52□□□□□ -0.73
CDH6-202ENST00000504835 IRF5Q13568 498 aa10.52□□□□□ -0.73
CDH6-202ENST00000504835 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
CDH6-202ENST00000504835 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
CDH6-202ENST00000504835 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.73
CDH6-202ENST00000504835 PAK6Q9NQU5 681 aaPredicted RBP10.52□□□□□ -0.73
CDH6-202ENST00000504835 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
CDH6-202ENST00000504835 TNPO2O14787 897 aaKnown RBP10.51□□□□□ -0.73
CDH6-202ENST00000504835 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
CDH6-202ENST00000504835 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
CDH6-202ENST00000504835 ANKRD13CQ8N6S4 541 aa10.51□□□□□ -0.73
CDH6-202ENST00000504835 HTATIP2Q9BUP3 242 aa10.51□□□□□ -0.73
CDH6-202ENST00000504835 LAMA2P24043 3122 aaKnown RBP10.51□□□□□ -0.73
CDH6-202ENST00000504835 ADH1BP00325 375 aa10.5□□□□□ -0.73
CDH6-202ENST00000504835 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 ARID4AP29374 1257 aaPredicted RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 FAM110CQ1W6H9 321 aa10.5□□□□□ -0.73
CDH6-202ENST00000504835 SPTY2D1Q68D10 685 aaPredicted RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 DIS3LQ8TF46 1054 aaKnown RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 DEFB118Q96PH6 123 aa10.5□□□□□ -0.73
CDH6-202ENST00000504835 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
CDH6-202ENST00000504835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDH6-202ENST00000504835 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms