RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
DDX41-203ENST00000504781 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
DDX41-203ENST00000504781 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
DDX41-203ENST00000504781 COL4A5P29400 1685 aa11.83□□□□□ -0.52
DDX41-203ENST00000504781 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
DDX41-203ENST00000504781 LAMB1P07942 1786 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 ATRNL1Q5VV63 1379 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 GOLGA8AA7E2F4 631 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 GOLGA6L22H0YM25 854 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 TBC1D12O60347 775 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 CAPN15O75808 1086 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 TNNI2P48788 182 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 GNAQP50148 359 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 EVX2Q03828 476 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 TROAPQ12815 778 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 NFIAQ12857 509 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 NTRK3Q16288 839 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 RTN1Q16799 776 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 TATDN1Q6P1N9 297 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 WASF1Q92558 559 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 ZSCAN16Q9H4T2 348 aaPredicted RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 NCOA5Q9HCD5 579 aaKnown RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 ABT1Q9ULW3 272 aaKnown RBP11.82□□□□□ -0.52
DDX41-203ENST00000504781 PCDHAC2Q9Y5I4 1007 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
DDX41-203ENST00000504781 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 DDTLA6NHG4 134 aaPredicted RBP11.81□□□□□ -0.52
DDX41-203ENST00000504781 WNT10BO00744 389 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 BAG4O95429 457 aaKnown RBP11.81□□□□□ -0.52
DDX41-203ENST00000504781 FDPSP14324 419 aaKnown RBP11.81□□□□□ -0.52
DDX41-203ENST00000504781 SMARCA1P28370 1054 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 CDC27P30260 824 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 KIF5BP33176 963 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 TCP10Q12799 353 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 PKP1Q13835 747 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 TNS4Q8IZW8 715 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
DDX41-203ENST00000504781 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
DDX41-203ENST00000504781 CNTNAP1P78357 1384 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 H3BQV1 296 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 JAK2O60674 1132 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 TOP1P11387 765 aaKnown RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 SHMT1P34896 483 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 VEGFBP49765 207 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 GMPSP49915 693 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 FMR1Q06787 632 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX41-203ENST00000504781 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 CERKLQ49MI3 558 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 SH3BP5LQ7L8J4 393 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 TRIM22Q8IYM9 498 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 MKL1Q969V6 931 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 DDX11Q96FC9 970 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 LZTS2Q9BRK4 669 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 MTMR4Q9NYA4 1195 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
DDX41-203ENST00000504781 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
DDX41-203ENST00000504781 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
DDX41-203ENST00000504781 NMT2O60551 498 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 F13A1P00488 732 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 CACNB3P54284 484 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 GRM1Q13255 1194 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 SKOR2Q2VWA4 1001 aaPredicted RBP11.79□□□□□ -0.52
DDX41-203ENST00000504781 SLC4A8Q2Y0W8 1093 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 ATL3Q6DD88 541 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 NUP133Q8WUM0 1156 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
DDX41-203ENST00000504781 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 ADARB2Q9NS39 739 aaKnown RBP11.79□□□□□ -0.52
DDX41-203ENST00000504781 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 PCNTO95613 3336 aa11.79□□□□□ -0.52
DDX41-203ENST00000504781 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
DDX41-203ENST00000504781 TRAF5O00463 557 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 DEXIO95424 95 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms