RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 TRIM32Q13049 653 aa27.38■■□□□ 1.97
CDC42SE2-207ENST00000504701 PAGR1Q9BTK6 254 aa27.38■■□□□ 1.97
CDC42SE2-207ENST00000504701 GJB1P08034 283 aa27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 GJA8P48165 433 aa27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 CLEC10AQ8IUN9 316 aa27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 PXYLP1Q8TE99 480 aa27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 C12orf42Q96LP6 360 aa27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 PUS7LQ9H0K6 701 aaKnown RBP27.37■■□□□ 1.97
CDC42SE2-207ENST00000504701 PORCNQ9H237 461 aa27.36■■□□□ 1.97
CDC42SE2-207ENST00000504701 A0A1W2PRG0 241 aa27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 MPHOSPH10O00566 681 aaKnown RBP27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 VCAM1P19320 739 aa27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 U2AF1L4Q8WU68 220 aaKnown RBP27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 KIAA1683Q9H0B3 1180 aa27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 CABP5Q9NP86 173 aa27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 ECHDC1Q9NTX5 307 aa27.35■■□□□ 1.97
CDC42SE2-207ENST00000504701 CNMDO75829 334 aa27.34■■□□□ 1.97
CDC42SE2-207ENST00000504701 ERVK-9P63128 1117 aa27.34■■□□□ 1.97
CDC42SE2-207ENST00000504701 ERVK-24P63145 666 aa27.34■■□□□ 1.97
CDC42SE2-207ENST00000504701 UBE2Q1Q7Z7E8 422 aa27.34■■□□□ 1.97
CDC42SE2-207ENST00000504701 GPRC5AQ8NFJ5 357 aa27.34■■□□□ 1.97
CDC42SE2-207ENST00000504701 UBE3CQ15386 1083 aa27.33■■□□□ 1.97
CDC42SE2-207ENST00000504701 KIAA1755Q5JYT7 1200 aa27.33■■□□□ 1.97
CDC42SE2-207ENST00000504701 OTUD7AQ8TE49 926 aaPredicted RBP27.33■■□□□ 1.97
CDC42SE2-207ENST00000504701 AKR1B1P15121 316 aa27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 CYP2B6P20813 491 aa27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 RRP1P56182 461 aaKnown RBP27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 TRIB2Q92519 343 aa27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 DEFB118Q96PH6 123 aa27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 SLC4A4Q9Y6R1 1079 aa27.32■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L15C9J2P7 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L13C9JLJ4 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L12C9JPN9 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L11C9JVI0 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L21D6R901 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L18D6R9N7 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L22D6RA61 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L17D6RBQ6 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L19D6RCP7 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L20D6RJB6 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP17L24Q0WX57 530 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 CATSPERGQ6ZRH7 1159 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 RPAP3Q9H6T3 665 aaPredicted RBP27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 ATP8A2Q9NTI2 1148 aa27.31■■□□□ 1.96
CDC42SE2-207ENST00000504701 RLFQ13129 1914 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 SGPL1O95470 568 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 USP14P54578 494 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 C12orf60Q5U649 245 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 SIAH1Q8IUQ4 282 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 NKX2-3Q8TAU0 364 aa27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 PAK6Q9NQU5 681 aaPredicted RBP27.3■■□□□ 1.96
CDC42SE2-207ENST00000504701 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
CDC42SE2-207ENST00000504701 CRBNQ96SW2 442 aa27.29■■□□□ 1.96
CDC42SE2-207ENST00000504701 BTBD7Q9P203 1132 aa27.29■■□□□ 1.96
CDC42SE2-207ENST00000504701 HMGCRP04035 888 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 CDK8P49336 464 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 CTR9Q6PD62 1173 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 GPR142Q7Z601 462 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 KBTBD3Q8NAB2 608 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 OSBP2Q969R2 916 aa27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.28■■□□□ 1.96
CDC42SE2-207ENST00000504701 SPDYE16A6NNV3 312 aaPredicted RBP27.27■■□□□ 1.96
CDC42SE2-207ENST00000504701 H0YGN5 161 aa27.27■■□□□ 1.96
CDC42SE2-207ENST00000504701 FARP2O94887 1054 aaPredicted RBP27.27■■□□□ 1.96
CDC42SE2-207ENST00000504701 CCL14Q16627 93 aa27.27■■□□□ 1.96
CDC42SE2-207ENST00000504701 SWAP70Q9UH65 585 aa27.27■■□□□ 1.96
CDC42SE2-207ENST00000504701 TMEM179Q6ZVK1 233 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 STK11IPQ8N1F8 1099 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 USP6NLQ92738 828 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 STRBPQ96SI9 672 aaKnown RBP27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 NUDT12Q9BQG2 462 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 RABGAP1Q9Y3P9 1069 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 ALPK3Q96L96 1907 aa27.26■■□□□ 1.95
CDC42SE2-207ENST00000504701 PARP14Q460N5 1801 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 A0A0G2JMZ2 1700 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 M0R2C6 588 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 TFRCP02786 760 aaKnown RBP27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 MAPK4P31152 587 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 MORN1Q5T089 497 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 ZSCAN25Q6NSZ9 544 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 C16orf86Q6ZW13 317 aa27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 DIS3LQ8TF46 1054 aaKnown RBP27.25■■□□□ 1.95
CDC42SE2-207ENST00000504701 PLEKHH3Q7Z736 793 aa27.24■■□□□ 1.95
CDC42SE2-207ENST00000504701 SPICE1Q8N0Z3 855 aa27.24■■□□□ 1.95
CDC42SE2-207ENST00000504701 PI4K2BQ8TCG2 481 aa27.24■■□□□ 1.95
CDC42SE2-207ENST00000504701 GTF3C2Q8WUA4 911 aaPredicted RBP27.24■■□□□ 1.95
CDC42SE2-207ENST00000504701 CRISPLD2Q9H0B8 497 aa27.24■■□□□ 1.95
CDC42SE2-207ENST00000504701 GSG1L2A8MUP6 293 aa27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 ICA1Q05084 483 aa27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 HABP4Q5JVS0 413 aaKnown RBP27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 SOCS4Q8WXH5 440 aa27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 DPF3Q92784 378 aa27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 GPATCH3Q96I76 525 aa27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 EPB41L4AQ9HCS5 686 aaPredicted RBP27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 GREB1LQ9C091 1923 aaPredicted RBP27.23■■□□□ 1.95
CDC42SE2-207ENST00000504701 RNF113AO15541 343 aaKnown RBP27.22■■□□□ 1.95
CDC42SE2-207ENST00000504701 WDR78Q5VTH9 848 aa27.22■■□□□ 1.95
CDC42SE2-207ENST00000504701 LBX2Q6XYB7 198 aa27.22■■□□□ 1.95
CDC42SE2-207ENST00000504701 CCAR1Q8IX12 1150 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms