RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.04
DDR1-254ENST00000504679 TACC3Q9Y6A5 838 aa21.52■■□□□ 1.04
DDR1-254ENST00000504679 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 TESPA1A2RU30 521 aaPredicted RBP21.51■■□□□ 1.03
DDR1-254ENST00000504679 EPB41L2O43491 1005 aaKnown RBP21.51■■□□□ 1.03
DDR1-254ENST00000504679 BACE1P56817 501 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 CCL15Q16663 113 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 OTUD7BQ6GQQ9 843 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
DDR1-254ENST00000504679 ESR2Q92731 530 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
DDR1-254ENST00000504679 PPP4R3BQ5MIZ7 849 aa21.5■■□□□ 1.03
DDR1-254ENST00000504679 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
DDR1-254ENST00000504679 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
DDR1-254ENST00000504679 A0A0G2JLL6 359 aaPredicted RBP21.49■■□□□ 1.03
DDR1-254ENST00000504679 SLC27A2O14975 620 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 USP14P54578 494 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 ATP2B2Q01814 1243 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 ICA1Q05084 483 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 PRRT2Q7Z6L0 340 aaPredicted RBP21.49■■□□□ 1.03
DDR1-254ENST00000504679 JMYQ8N9B5 988 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 BEGAINQ9BUH8 593 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 TMOD4Q9NZQ9 345 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
DDR1-254ENST00000504679 LAMA4Q16363 1823 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 E7EWF7 191 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 EEF2P13639 858 aaKnown RBP21.48■■□□□ 1.03
DDR1-254ENST00000504679 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 USP17L2Q6R6M4 530 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 GADL1Q6ZQY3 521 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 ACER1Q8TDN7 264 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 BRI3BPQ8WY22 251 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 FEZ1Q99689 392 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 KIAA1683Q9H0B3 1180 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 MTMR4Q9NYA4 1195 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 NYAP2Q9P242 653 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
DDR1-254ENST00000504679 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 B4E1Z4 1266 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
DDR1-254ENST00000504679 HMGCS2P54868 508 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 MTMR2Q13614 643 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 CCDC178Q5BJE1 867 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 IFNL1Q8IU54 200 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 NCOA7Q8NI08 942 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 USP26Q9BXU7 913 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 TCP11L1Q9NUJ3 509 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 ZSWIM5Q9P217 1185 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 NEDD4P46934 1319 aa21.47■■□□□ 1.03
DDR1-254ENST00000504679 KDM4AO75164 1064 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 TTLL1O95922 423 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 ALDH1A1P00352 501 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 RALYLQ86SE5 291 aaKnown RBP21.46■■□□□ 1.03
DDR1-254ENST00000504679 IQCA1Q86XH1 822 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
DDR1-254ENST00000504679 MKL1Q969V6 931 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 PTPN18Q99952 460 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 TMX2Q9Y320 296 aa21.46■■□□□ 1.03
DDR1-254ENST00000504679 A0A1W2PRG0 241 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
DDR1-254ENST00000504679 ANKRD23Q86SG2 305 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 CLEC10AQ8IUN9 316 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 TTC14Q96N46 770 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 PLIN4Q96Q06 1357 aa21.45■■□□□ 1.02
DDR1-254ENST00000504679 BTBD19C9JJ37 291 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 MCCP23508 829 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 HSPA4P34932 840 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 PABPC4Q13310 644 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-254ENST00000504679 MOGSQ13724 837 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 KRT32Q14532 448 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 ZCCHC17Q9NP64 241 aaKnown RBP21.44■■□□□ 1.02
DDR1-254ENST00000504679 EMILIN3Q9NT22 766 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 WBP1LQ9NX94 342 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 STX8Q9UNK0 236 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
DDR1-254ENST00000504679 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
DDR1-254ENST00000504679 NMT2O60551 498 aa21.43■■□□□ 1.02
DDR1-254ENST00000504679 GPAT2Q6NUI2 795 aa21.43■■□□□ 1.02
DDR1-254ENST00000504679 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
DDR1-254ENST00000504679 RNF186Q9NXI6 227 aa21.43■■□□□ 1.02
DDR1-254ENST00000504679 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
DDR1-254ENST00000504679 PDHXO00330 501 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 CA12O43570 354 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 TRPA1O75762 1119 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 STOX1Q6ZVD7 989 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 FAM43AQ8N2R8 423 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 C12orf42Q96LP6 360 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 ZKSCAN3Q9BRR0 538 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 UBAC1Q9BSL1 405 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 GREB1LQ9C091 1923 aaPredicted RBP21.42■■□□□ 1.02
DDR1-254ENST00000504679 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 SYNPO2Q9UMS6 1093 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 SLC45A1Q9Y2W3 748 aa21.42■■□□□ 1.02
DDR1-254ENST00000504679 THSD7BQ9C0I4 1608 aa21.41■■□□□ 1.02
DDR1-254ENST00000504679 RAD21O60216 631 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms