RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 VPS52Q8N1B4 723 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 BLZF1Q9H2G9 400 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 SLC5A4Q9NY91 659 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 KDM3AQ9Y4C1 1321 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 KDRP35968 1356 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 BCRP11274 1271 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 P4HA1P13674 534 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 POSTNQ15063 836 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 HERC4Q5GLZ8 1057 aaPredicted RBP7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 BEND3Q5T5X7 828 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 C8orf74Q6P047 294 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 MICALL1Q8N3F8 863 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TEKT1Q969V4 418 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TAB2Q9NYJ8 693 aa7.98□□□□□ -1.13
SYNPO2-205ENST00000504178 TCP10L2B9ZVM9 353 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 MLH3Q9UHC1 1453 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 YWHAEP62258 255 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 KRT40Q6A162 431 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 DCUN1D2Q6PH85 259 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 C2CD5Q86YS7 1000 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 HACE1Q8IYU2 909 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 E7EWF7 191 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 ACTN4O43707 911 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 PPP2R5DQ14738 602 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 ERCC6LQ2NKX8 1250 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 AFAP1L2Q8N4X5 818 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 DSCC1Q9BVC3 393 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 VPS54Q9P1Q0 977 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 MYO1AQ9UBC5 1043 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 BCS1LQ9Y276 419 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 PNMA6EA0A0J9YXQ4 647 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 hCG_1642624A0A1W2PR95 340 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 EIF4A1P60842 406 aaKnown RBP7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 KIF22Q14807 665 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 LONRF3Q496Y0 759 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 SFMBT2Q5VUG0 894 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 ARFGAP2Q8N6H7 521 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 METTL13Q8N6R0 699 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 TBC1D31Q96DN5 1066 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 SMCO2A6NFE2 343 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 DEPTORQ8TB45 409 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 ZSCAN10Q96SZ4 725 aaPredicted RBP7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 FAM184BQ9ULE4 1060 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 TRPC6Q9Y210 931 aa7.97□□□□□ -1.13
SYNPO2-205ENST00000504178 CHL1O00533 1208 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 ZNF202O95125 648 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 MLKLQ8NB16 471 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 SGSM2O43147 1006 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 GAS7O60861 476 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 VIMP08670 466 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 ATP2B4P23634 1241 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 SYCE1Q8N0S2 351 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 RIOK1Q9BRS2 568 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 LSM14BQ9BX40 385 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 ZHX1Q9UKY1 873 aaPredicted RBP7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 TRIM35Q9UPQ4 493 aa7.96□□□□□ -1.13
SYNPO2-205ENST00000504178 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 LRMPQ12912 555 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 TNFAIP1Q13829 316 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 MFSD14BQ5SR56 506 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 CHURC1Q8WUH1 139 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 CD2APQ9Y5K6 639 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 SEC24BO95487 1268 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 CD19P15391 556 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 TNNI1P19237 187 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 ERCC3P19447 782 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 HPDP32754 393 aaPredicted RBP7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 EVCP57679 992 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 GNPTABQ3T906 1256 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 CEP85LQ5SZL2 805 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 ANO3Q9BYT9 981 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 PZPP20742 1482 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 HSPA1LP34931 641 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 TUBB2AQ13885 445 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 DOK7Q18PE1 504 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 CDC37L1Q7L3B6 337 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 GLG1Q92896 1179 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 TUBB2BQ9BVA1 445 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 NT5C3AQ9H0P0 336 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
SYNPO2-205ENST00000504178 IRX5P78411 483 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 IFT20Q8IY31 132 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ATP8A2Q9NTI2 1148 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 SWAP70Q9UH65 585 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 PALM3A6NDB9 673 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 GNA14O95837 355 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 POLR2MP0CAP2 368 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 PNOCQ13519 176 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 GPR162Q16538 588 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ARHGAP44Q17R89 818 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM47CQ5HY64 1035 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms