RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 USP17L10C9JJH3 530 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 MAP2K1Q02750 393 aaPredicted RBP21.52■■□□□ 1.04
DDR1-252ENST00000504152 TRDNQ13061 729 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 FAM47AQ5JRC9 791 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 TBC1D10CQ8IV04 446 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 NEDD1Q8NHV4 660 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 KRT23Q9C075 422 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 TACC3Q9Y6A5 838 aa21.52■■□□□ 1.04
DDR1-252ENST00000504152 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 TESPA1A2RU30 521 aaPredicted RBP21.51■■□□□ 1.03
DDR1-252ENST00000504152 EPB41L2O43491 1005 aaKnown RBP21.51■■□□□ 1.03
DDR1-252ENST00000504152 BACE1P56817 501 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 CCL15Q16663 113 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 OTUD7BQ6GQQ9 843 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
DDR1-252ENST00000504152 ESR2Q92731 530 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
DDR1-252ENST00000504152 PPP4R3BQ5MIZ7 849 aa21.5■■□□□ 1.03
DDR1-252ENST00000504152 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
DDR1-252ENST00000504152 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
DDR1-252ENST00000504152 A0A0G2JLL6 359 aaPredicted RBP21.49■■□□□ 1.03
DDR1-252ENST00000504152 SLC27A2O14975 620 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 USP14P54578 494 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 ATP2B2Q01814 1243 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 ICA1Q05084 483 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 PRRT2Q7Z6L0 340 aaPredicted RBP21.49■■□□□ 1.03
DDR1-252ENST00000504152 BEGAINQ9BUH8 593 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 TMOD4Q9NZQ9 345 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
DDR1-252ENST00000504152 LAMA4Q16363 1823 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 E7EWF7 191 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 EEF2P13639 858 aaKnown RBP21.48■■□□□ 1.03
DDR1-252ENST00000504152 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 USP17L2Q6R6M4 530 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 GADL1Q6ZQY3 521 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 ACER1Q8TDN7 264 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 BRI3BPQ8WY22 251 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 FEZ1Q99689 392 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 KIAA1683Q9H0B3 1180 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 MTMR4Q9NYA4 1195 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 NYAP2Q9P242 653 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
DDR1-252ENST00000504152 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 B4E1Z4 1266 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
DDR1-252ENST00000504152 HMGCS2P54868 508 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 MTMR2Q13614 643 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 CCDC178Q5BJE1 867 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 IFNL1Q8IU54 200 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 NCOA7Q8NI08 942 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 USP26Q9BXU7 913 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 TCP11L1Q9NUJ3 509 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 ZSWIM5Q9P217 1185 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 NEDD4P46934 1319 aa21.47■■□□□ 1.03
DDR1-252ENST00000504152 KDM4AO75164 1064 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 TTLL1O95922 423 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 ALDH1A1P00352 501 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 RALYLQ86SE5 291 aaKnown RBP21.46■■□□□ 1.03
DDR1-252ENST00000504152 IQCA1Q86XH1 822 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
DDR1-252ENST00000504152 MKL1Q969V6 931 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 PTPN18Q99952 460 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 TMX2Q9Y320 296 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 THSD7BQ9C0I4 1608 aa21.46■■□□□ 1.03
DDR1-252ENST00000504152 A0A1W2PRG0 241 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
DDR1-252ENST00000504152 ANKRD23Q86SG2 305 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 CLEC10AQ8IUN9 316 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 TTC14Q96N46 770 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 PLIN4Q96Q06 1357 aa21.45■■□□□ 1.02
DDR1-252ENST00000504152 BTBD19C9JJ37 291 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 MCCP23508 829 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 HSPA4P34932 840 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 PABPC4Q13310 644 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-252ENST00000504152 MOGSQ13724 837 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 KRT32Q14532 448 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 ZCCHC17Q9NP64 241 aaKnown RBP21.44■■□□□ 1.02
DDR1-252ENST00000504152 EMILIN3Q9NT22 766 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 WBP1LQ9NX94 342 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 STX8Q9UNK0 236 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
DDR1-252ENST00000504152 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
DDR1-252ENST00000504152 NMT2O60551 498 aa21.43■■□□□ 1.02
DDR1-252ENST00000504152 GPAT2Q6NUI2 795 aa21.43■■□□□ 1.02
DDR1-252ENST00000504152 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
DDR1-252ENST00000504152 RNF186Q9NXI6 227 aa21.43■■□□□ 1.02
DDR1-252ENST00000504152 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
DDR1-252ENST00000504152 PDHXO00330 501 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 CA12O43570 354 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 TRPA1O75762 1119 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 STOX1Q6ZVD7 989 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 FAM43AQ8N2R8 423 aa21.42■■□□□ 1.02
DDR1-252ENST00000504152 C12orf42Q96LP6 360 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms