RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 ZYXQ15942 572 aaKnown RBP19.35■□□□□ 0.69
DDR1-250ENST00000503628 SEMA6BQ9H3T3 888 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 SNRKQ9NRH2 765 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 SAP30BPQ9UHR5 308 aaKnown RBP19.35■□□□□ 0.69
DDR1-250ENST00000503628 LTBP2Q14767 1821 aa19.35■□□□□ 0.69
DDR1-250ENST00000503628 SLC15A5A6NIM6 579 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 MSCO60682 206 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 UQCRFS1P1P0C7P4 283 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 PTPREP23469 700 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 MTX1Q13505 466 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
DDR1-250ENST00000503628 MAFAQ8NHW3 353 aaPredicted RBP19.34■□□□□ 0.69
DDR1-250ENST00000503628 MYO5AQ9Y4I1 1855 aaKnown RBP19.33■□□□□ 0.69
DDR1-250ENST00000503628 USP17L15C9J2P7 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L13C9JLJ4 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L11C9JVI0 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L18D6R9N7 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L22D6RA61 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L17D6RBQ6 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L19D6RCP7 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L20D6RJB6 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 DNM1LO00429 736 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 GH2P01242 217 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 GNAI3P08754 354 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 CYP2C19P33261 490 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 USP17L24Q0WX57 530 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 ATF7IPQ6VMQ6 1270 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 TRPV1Q8NER1 839 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 NPLOC4Q8TAT6 608 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 RCAN3Q9UKA8 241 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 ATP11BQ9Y2G3 1177 aa19.33■□□□□ 0.68
DDR1-250ENST00000503628 RLFQ13129 1914 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 TRIM27P14373 513 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 C9orf50Q5SZB4 431 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
DDR1-250ENST00000503628 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 CATSPERGQ6ZRH7 1159 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 C12orf42Q96LP6 360 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 FEZ1Q99689 392 aa19.32■□□□□ 0.68
DDR1-250ENST00000503628 SPTBN5Q9NRC6 3674 aaKnown RBP19.32■□□□□ 0.68
DDR1-250ENST00000503628 HLA-DOAP06340 250 aa19.31■□□□□ 0.68
DDR1-250ENST00000503628 HOXC6P09630 235 aa19.31■□□□□ 0.68
DDR1-250ENST00000503628 G3BP1Q13283 466 aaKnown RBP eCLIP19.31■□□□□ 0.68
DDR1-250ENST00000503628 SLC39A5Q6ZMH5 540 aa19.31■□□□□ 0.68
DDR1-250ENST00000503628 BTBD7Q9P203 1132 aa19.31■□□□□ 0.68
DDR1-250ENST00000503628 IVNS1ABPQ9Y6Y0 642 aa19.31■□□□□ 0.68
DDR1-250ENST00000503628 MYH1P12882 1939 aa19.3■□□□□ 0.68
DDR1-250ENST00000503628 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
DDR1-250ENST00000503628 DYNLL1P63167 89 aaKnown RBP19.3■□□□□ 0.68
DDR1-250ENST00000503628 GRB14Q14449 540 aa19.3■□□□□ 0.68
DDR1-250ENST00000503628 MYLIPQ8WY64 445 aa19.3■□□□□ 0.68
DDR1-250ENST00000503628 BADQ92934 168 aa19.3■□□□□ 0.68
DDR1-250ENST00000503628 PRDM6Q9NQX0 595 aa19.3■□□□□ 0.68
DDR1-250ENST00000503628 PRDM5Q9NQX1 630 aaPredicted RBP19.3■□□□□ 0.68
DDR1-250ENST00000503628 IGHA2P01877 340 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 CYBAP13498 195 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 ANO1Q5XXA6 986 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 ARRDC4Q8NCT1 418 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 TTYH1Q9H313 450 aaPredicted RBP19.29■□□□□ 0.68
DDR1-250ENST00000503628 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
DDR1-250ENST00000503628 PNMA6EA0A0J9YXQ4 647 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 VCAM1P19320 739 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 TATDN1Q6P1N9 297 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 KIAA1683Q9H0B3 1180 aa19.28■□□□□ 0.68
DDR1-250ENST00000503628 KBTBD13C9JR72 458 aa19.27■□□□□ 0.68
DDR1-250ENST00000503628 USP14P54578 494 aa19.27■□□□□ 0.68
DDR1-250ENST00000503628 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
DDR1-250ENST00000503628 TRIM60Q495X7 471 aa19.27■□□□□ 0.68
DDR1-250ENST00000503628 DPP9Q86TI2 863 aa19.27■□□□□ 0.68
DDR1-250ENST00000503628 DBNDD2Q9BQY9 259 aa19.27■□□□□ 0.68
DDR1-250ENST00000503628 SPDYE16A6NNV3 312 aaPredicted RBP19.26■□□□□ 0.67
DDR1-250ENST00000503628 MYCNP04198 464 aaPredicted RBP19.26■□□□□ 0.67
DDR1-250ENST00000503628 CCDC158Q5M9N0 1113 aa19.26■□□□□ 0.67
DDR1-250ENST00000503628 SH3RF1Q7Z6J0 888 aa19.26■□□□□ 0.67
DDR1-250ENST00000503628 RPAP3Q9H6T3 665 aaPredicted RBP19.26■□□□□ 0.67
DDR1-250ENST00000503628 PIH1D3Q9NQM4 214 aaKnown RBP19.26■□□□□ 0.67
DDR1-250ENST00000503628 CDH23Q9H251 3354 aa19.26■□□□□ 0.67
DDR1-250ENST00000503628 TRIM43BA6NCK2 446 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 GNAI2P04899 355 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 CYP7A1P22680 504 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 ADORA2AP29274 412 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 ZAP70P43403 619 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 ABCB5Q2M3G0 1257 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 CERKLQ49MI3 558 aaPredicted RBP19.25■□□□□ 0.67
DDR1-250ENST00000503628 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
DDR1-250ENST00000503628 TRIM43Q96BQ3 446 aaPredicted RBP19.25■□□□□ 0.67
DDR1-250ENST00000503628 PDLIM7Q9NR12 457 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
DDR1-250ENST00000503628 SEPT4O43236 478 aa19.24■□□□□ 0.67
DDR1-250ENST00000503628 FOSL2P15408 326 aa19.24■□□□□ 0.67
DDR1-250ENST00000503628 USP5P45974 858 aa19.24■□□□□ 0.67
DDR1-250ENST00000503628 SNX17Q15036 470 aa19.24■□□□□ 0.67
DDR1-250ENST00000503628 TNNI3KQ59H18 835 aa19.24■□□□□ 0.67
DDR1-250ENST00000503628 OLFML2BQ68BL8 750 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms