RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CALM1P0DP23 149 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 CALM2P0DP24 149 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 CALM3P0DP25 149 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
USP46-204ENST00000503060 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
USP46-204ENST00000503060 NDUFA8P51970 172 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 TROAPQ12815 778 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 PTPAQ15257 358 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 MAP3K14Q99558 947 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
USP46-204ENST00000503060 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
USP46-204ENST00000503060 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 KCNJ14Q9UNX9 436 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 MROH7-TTC4A0A0A0MT08 1334 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 LRRC37AA6NMS7 1700 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 AP5Z1O43299 807 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 PPP6R2O75170 966 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 FUT2Q10981 343 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
USP46-204ENST00000503060 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
USP46-204ENST00000503060 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 BTBD18B2RXH4 712 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 PLSCR1O15162 318 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 CAVIN2O95810 425 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 CMA1P23946 247 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 AKAP17AQ02040 695 aaKnown RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 FOXP1Q9H334 677 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 NMT2O60551 498 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
USP46-204ENST00000503060 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
USP46-204ENST00000503060 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 NT5C2P49902 561 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 ZNF165P49910 485 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
USP46-204ENST00000503060 STX1AQ16623 288 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 ZNF772Q68DY9 489 aaPredicted RBP13.3□□□□□ -0.28
USP46-204ENST00000503060 ANKRD31Q8N7Z5 1873 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 PKN1Q16512 942 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 SDF4Q9BRK5 362 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
USP46-204ENST00000503060 APBA3O96018 575 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 PFKFB1P16118 471 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 CALRP27797 417 aaKnown RBP13.29□□□□□ -0.28
USP46-204ENST00000503060 BTDP43251 543 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 AMOTL1Q8IY63 956 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 MPNDQ8N594 471 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.29□□□□□ -0.28
USP46-204ENST00000503060 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 GPR75-ASB3A0A0A6YYF3 556 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 ZNF202O95125 648 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 XBP1P17861 261 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
USP46-204ENST00000503060 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
USP46-204ENST00000503060 TBC1D22AQ8WUA7 517 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 DYNLL2Q96FJ2 89 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 FAM205AQ6ZU69 1335 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 MYH6P13533 1939 aa13.29□□□□□ -0.28
USP46-204ENST00000503060 TFAP4Q01664 338 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 NR5A1Q13285 461 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 RILPL1Q5EBL4 403 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 C11orf57Q6ZUT1 292 aaPredicted RBP13.28□□□□□ -0.28
USP46-204ENST00000503060 MAPKAPK5Q8IW41 473 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
USP46-204ENST00000503060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
USP46-204ENST00000503060 FAM237AA0A1B0GTK4 181 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 CUTAO60888 179 aa13.28□□□□□ -0.28
USP46-204ENST00000503060 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
USP46-204ENST00000503060 NPR1P16066 1061 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms