RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 ZKSCAN1P17029 563 aaPredicted RBP7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 CYP7A1P22680 504 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 MAP2K5Q13163 448 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 Q3C1V9 767 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 LHX8Q68G74 356 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 CEP85Q6P2H3 762 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 POTEEQ6S8J3 1075 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 PLEKHH3Q7Z736 793 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 RPAP2Q8IXW5 612 aaPredicted RBP7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 CABP5Q9NP86 173 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 SNRKQ9NRH2 765 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 HOXC10Q9NYD6 342 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 TNNQ9UQP3 1299 aa7.43□□□□□ -1.22
LSM3P4-201ENST00000502948 ZNFX1Q9P2E3 1918 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 CNMDO75829 334 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 IDH1O75874 414 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 ECM2O94769 699 aaPredicted RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 GDF11O95390 407 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 GH2P01242 217 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 CYP2B6P20813 491 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 PTPREP23469 700 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 SHMT1P34896 483 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 USP5P45974 858 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 DYNLL1P63167 89 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 CACNB2Q08289 660 aaPredicted RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 GRB14Q14449 540 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 ABCB5Q2M3G0 1257 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 CERKLQ49MI3 558 aaPredicted RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 TDHQ8IZJ6 230 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 ABRAQ8N0Z2 381 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 MAGEB6Q8N7X4 407 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 MB21D1Q8N884 522 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 DIS3LQ8TF46 1054 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 LPAR1Q92633 364 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 EDC3Q96F86 508 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 PORCNQ9H237 461 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 CHMP4BQ9H444 224 aaKnown RBP7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 SWAP70Q9UH65 585 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 PFASO15067 1338 aa7.42□□□□□ -1.22
LSM3P4-201ENST00000502948 LTBP2Q14767 1821 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 GREB1LQ9C091 1923 aaPredicted RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 DNM1LO00429 736 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 RLBP1P12271 317 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 VCAM1P19320 739 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 TRIM32Q13049 653 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 COG2Q14746 738 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 MFSD14CQ5VZR4 134 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 OLFML2BQ68BL8 750 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 FAM109BQ6ICB4 259 aaPredicted RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 TMEM179Q6ZVK1 233 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 ITPRIPQ8IWB1 547 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 CCAR1Q8IX12 1150 aaKnown RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 KIF1BPQ96EK5 621 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 CRNKL1Q9BZJ0 848 aaKnown RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 CCDC8Q9H0W5 538 aaPredicted RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 ATP8A2Q9NTI2 1148 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 STAP2Q9UGK3 403 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 NRBP1Q9UHY1 535 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
LSM3P4-201ENST00000502948 MAGEB6P1A0A0J9YX57 407 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 TCRBV5S4A2TA0A5A2 114 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 SOX1O00570 391 aaPredicted RBP7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 HMMRO75330 724 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 GUCY1A2P33402 732 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 PLCD1P51178 756 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 AACSQ86V21 672 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 CCDC17Q96LX7 622 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 MROH8Q9H579 483 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 ANTXR1Q9H6X2 564 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 SH2D4AQ9H788 454 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 DCP1AQ9NPI6 582 aaPredicted RBP7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 SLC5A4Q9NY91 659 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 DDX20Q9UHI6 824 aaKnown RBP7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 ADAMTS5Q9UNA0 930 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 STXBP5LQ9Y2K9 1186 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 IVNS1ABPQ9Y6Y0 642 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 ROBO3Q96MS0 1386 aa7.4□□□□□ -1.22
LSM3P4-201ENST00000502948 COL11A1P12107 1806 aaPredicted RBP7.4□□□□□ -1.23
LSM3P4-201ENST00000502948 PLXNA1Q9UIW2 1896 aa7.4□□□□□ -1.23
LSM3P4-201ENST00000502948 BAZ2AQ9UIF9 1905 aaKnown RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 POLR3DP05423 398 aaPredicted RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 CYBAP13498 195 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 PDE6AP16499 860 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 ATP5JP18859 108 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 MAGEA10P43363 369 aaPredicted RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 SNX17Q15036 470 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 RAB3GAP1Q15042 981 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 UBE3CQ15386 1083 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 CCL14Q16627 93 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms