RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 UBOX5O94941 541 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 NME1P15531 152 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 DNAJA1P31689 397 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 ARID5AQ03989 594 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 FBXW10Q5XX13 1052 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 CDH24Q86UP0 819 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 LSRQ86X29 649 aaPredicted RBP6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 SLC9A7Q96T83 725 aa6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
CDC42SE2-204ENST00000502639 TGFB1P01137 390 aa6.91□□□□□ -1.3
CDC42SE2-204ENST00000502639 HOXA10P31260 410 aaPredicted RBP6.91□□□□□ -1.3
CDC42SE2-204ENST00000502639 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
CDC42SE2-204ENST00000502639 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
CDC42SE2-204ENST00000502639 SLC51AQ86UW1 340 aa6.91□□□□□ -1.3
CDC42SE2-204ENST00000502639 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 RGS13O14921 159 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 MED26O95402 600 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 IMPDH2P12268 514 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 ETFBP38117 255 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 EIF6P56537 245 aaKnown RBP6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 ZYXQ15942 572 aaKnown RBP6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 LRRFIP1Q32MZ4 808 aaKnown RBP6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.3
CDC42SE2-204ENST00000502639 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 MLECQ14165 292 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 MCTP1Q6DN14 999 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 FAM181AQ8N9Y4 354 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 VWCEQ96DN2 955 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 OSBPL1AQ9BXW6 950 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 ATG3Q9NT62 314 aa6.89□□□□□ -1.31
CDC42SE2-204ENST00000502639 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 RAG1P15918 1043 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 OXCT1P55809 520 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 CYP27C1Q4G0S4 372 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 TMEM192Q8IY95 271 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 TAB3Q8N5C8 712 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 PIM2Q9P1W9 311 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 PLAGL2Q9UPG8 496 aa6.88□□□□□ -1.31
CDC42SE2-204ENST00000502639 LTBP3Q9NS15 1303 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 FAM86C2PA6NEL3 165 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 CYP27A1Q02318 531 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 UNC5AQ6ZN44 842 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 TM9SF2Q99805 663 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 LRRC4CQ9HCJ2 640 aa6.87□□□□□ -1.31
CDC42SE2-204ENST00000502639 A0A1W2PQH9 124 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 LRRN2O75325 713 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 FOSL1P15407 271 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 Q96M66 194 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 METTL22Q9BUU2 404 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 ZC3H7BQ9UGR2 993 aaKnown RBP6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 RNF112Q9ULX5 631 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 LEMD3Q9Y2U8 911 aa6.86□□□□□ -1.31
CDC42SE2-204ENST00000502639 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 CYP26A1O43174 497 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 GBP1P32455 592 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 NKPD1Q17RQ9 610 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 MSMPQ1L6U9 139 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 TTC6Q86TZ1 520 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 OR6P1Q8NGX9 317 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 TANGO6Q9C0B7 1094 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 TPX2Q9ULW0 747 aaKnown RBP6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
CDC42SE2-204ENST00000502639 CBX7O95931 251 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 ZNF865P0CJ78 1059 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 CASP7P55210 303 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 PLD6Q8N2A8 252 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 C19orf47Q8N9M1 422 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 SLC6A18Q96N87 628 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 CAPN6Q9Y6Q1 641 aa6.84□□□□□ -1.31
CDC42SE2-204ENST00000502639 C9IYK1 514 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 CCNFP41002 786 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 ETV3P41162 512 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 SPACA3Q8IXA5 215 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms