RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SWI5Q1ZZU3 235 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 SEC13P55735 322 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 GUCY1B3Q02153 619 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 NCOA4Q13772 614 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 CHPFQ8IZ52 775 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 NSUN7Q8NE18 718 aaKnown RBP10.31□□□□□ -0.76
FN1-227ENST00000498719 CBX8Q9HC52 389 aa10.31□□□□□ -0.76
FN1-227ENST00000498719 DIS3Q9Y2L1 958 aaKnown RBP10.31□□□□□ -0.76
FN1-227ENST00000498719 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 MYH15Q9Y2K3 1946 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 MAST3O60307 1309 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 A0A087WWV3 80 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 ESYT3A0FGR9 886 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 M0R2C6 588 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 IFIT1P09914 478 aaKnown RBP10.3□□□□□ -0.76
FN1-227ENST00000498719 SRGNP10124 158 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 EXOSC10Q01780 885 aaKnown RBP10.3□□□□□ -0.76
FN1-227ENST00000498719 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
FN1-227ENST00000498719 PSMD2Q13200 908 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 HSP90AB3PQ58FF7 597 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 DHX32Q7L7V1 743 aaKnown RBP10.3□□□□□ -0.76
FN1-227ENST00000498719 MKNK1Q9BUB5 465 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 SNTG2Q9NY99 539 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
FN1-227ENST00000498719 RFX7Q2KHR2 1363 aa10.3□□□□□ -0.76
FN1-227ENST00000498719 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 FAM177BA6PVY3 158 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 E7EWF7 191 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 EYA2O00167 538 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 PFKFB2O60825 505 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 ADORA1P30542 326 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
FN1-227ENST00000498719 IL15P40933 162 aaPredicted RBP10.29□□□□□ -0.76
FN1-227ENST00000498719 CHMP4BP1P59074 171 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 CCDC93Q567U6 631 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 DNAJC25Q9H1X3 360 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 CLSTN2Q9H4D0 955 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 PRDM11Q9NQV5 511 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 ANAPC4Q9UJX5 808 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
FN1-227ENST00000498719 PTGS1P23219 599 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 HAND2P61296 217 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 SUGP1Q8IWZ8 645 aaKnown RBP10.29□□□□□ -0.76
FN1-227ENST00000498719 OSBP2Q969R2 916 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 PDCL3Q9H2J4 239 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
FN1-227ENST00000498719 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 TGFB3P10600 412 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 POU3F3P20264 500 aaPredicted RBP10.28□□□□□ -0.76
FN1-227ENST00000498719 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 PI16Q6UXB8 463 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 SYNE4Q8N205 404 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 RELTQ969Z4 430 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 DSCC1Q9BVC3 393 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 HELLSQ9NRZ9 838 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
FN1-227ENST00000498719 ABCC6O95255 1503 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 KCPQ6ZWJ8 1503 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 PCDH11XQ9BZA7 1347 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 PCDH11YQ9BZA8 1340 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 CCDC85CA6NKD9 419 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 SCARF1Q14162 830 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 TKFCQ3LXA3 575 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 RBM43Q6ZSC3 357 aaKnown RBP10.28□□□□□ -0.76
FN1-227ENST00000498719 KIAA0907Q7Z7F0 614 aaPredicted RBP10.28□□□□□ -0.76
FN1-227ENST00000498719 RAB11FIP4Q86YS3 637 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 CCDC191Q8NCU4 936 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 PARP4Q9UKK3 1724 aaKnown RBP10.28□□□□□ -0.76
FN1-227ENST00000498719 ADGRG1Q9Y653 693 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 CPDO75976 1380 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 WDR17Q8IZU2 1322 aa10.28□□□□□ -0.76
FN1-227ENST00000498719 DYNC1I1O14576 645 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 FOXP2O15409 715 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.76
FN1-227ENST00000498719 HIP1RO75146 1068 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 RNASEH2AO75792 299 aaKnown RBP10.27□□□□□ -0.76
FN1-227ENST00000498719 CTSHP09668 335 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 LRMPQ12912 555 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 DALRD3Q5D0E6 543 aaKnown RBP10.27□□□□□ -0.76
FN1-227ENST00000498719 MYRIPQ8NFW9 859 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.76
FN1-227ENST00000498719 USP28Q96RU2 1077 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 NEUROD4Q9HD90 331 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 STRN4Q9NRL3 753 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 SPTLC3Q9NUV7 552 aa10.27□□□□□ -0.76
FN1-227ENST00000498719 NWD2Q9ULI1 1742 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 MYL1P05976 194 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 CD46P15529 392 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 PDIA3P30101 505 aaKnown RBP10.27□□□□□ -0.77
FN1-227ENST00000498719 ZNF165P49910 485 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 HSPA2P54652 639 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 504.5 ms