RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 KALRNO60229 2985 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 LPXNO60711 386 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 KDM4AO75164 1064 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 KLRK1P26718 216 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 AVPR2P30518 371 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 SF3B3Q15393 1217 aaKnown RBP6.36□□□□□ -1.39
CSTF1-207ENST00000498689 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-207ENST00000498689 THSD4Q6ZMP0 1018 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 TRIM67Q6ZTA4 783 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 WNT2BQ93097 391 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
CSTF1-207ENST00000498689 TDRD3Q9H7E2 651 aaKnown RBP6.36□□□□□ -1.39
CSTF1-207ENST00000498689 TACC3Q9Y6A5 838 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 MED23Q9ULK4 1368 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 SH3TC1Q8TE82 1336 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 MMP14P50281 582 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 FOSBP53539 338 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 GRB10Q13322 594 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 GADL1Q6ZQY3 521 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 MRPL50Q8N5N7 158 aaKnown RBP6.35□□□□□ -1.39
CSTF1-207ENST00000498689 SMCR8Q8TEV9 937 aaPredicted RBP6.35□□□□□ -1.39
CSTF1-207ENST00000498689 LPAR1Q92633 364 aa6.35□□□□□ -1.39
CSTF1-207ENST00000498689 HNRNPABQ99729 332 aaKnown RBP6.35□□□□□ -1.39
CSTF1-207ENST00000498689 NLRC5Q86WI3 1866 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 TET1Q8NFU7 2136 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 XDHP47989 1333 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 CNOT1A5YKK6 2376 aaKnown RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 GNAT3A8MTJ3 354 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 H3BQ06 376 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 PQBP1O60828 265 aaKnown RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 CSF2RAP15509 400 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 ZKSCAN1P17029 563 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 RBM5P52756 815 aaKnown RBP eCLIP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 CACNB3P54284 484 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 FAAP100Q0VG06 881 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 RSPO4Q2I0M5 234 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 RTL5Q5HYW3 569 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 MIGA2Q7L4E1 593 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 RNF135Q8IUD6 432 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 TRPV1Q8NER1 839 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 ARNTL2Q8WYA1 636 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 FAM89AQ96GI7 184 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 IRF2BPLQ9H1B7 796 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 TMEM39AQ9NV64 488 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 FLRT1Q9NZU1 646 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
CSTF1-207ENST00000498689 ADAMTS20P59510 1910 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
CSTF1-207ENST00000498689 KRT38O76015 456 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 PDGFBP01127 241 aaPredicted RBP6.33□□□□□ -1.4
CSTF1-207ENST00000498689 CA3P07451 260 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 ADRB1P08588 477 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 PDE4AP27815 886 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 CNGA1P29973 690 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 EPHA10Q5JZY3 1008 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 ZBED2Q9BTP6 218 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 SLC4A5Q9BY07 1137 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 ADAM33Q9BZ11 813 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 RYDENQ9NUL5 291 aaKnown RBP6.33□□□□□ -1.4
CSTF1-207ENST00000498689 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 RELNP78509 3460 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 TICRRQ7Z2Z1 1910 aa6.33□□□□□ -1.4
CSTF1-207ENST00000498689 ZNF536O15090 1300 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ZNF521Q96K83 1311 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 A0A0G2JLL6 359 aaPredicted RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 BHMG1C9JSJ3 638 aaPredicted RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 TIMP1P01033 207 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ANXA1P04083 346 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ATP2B4P23634 1241 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 TNFAIP1Q13829 316 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 PKN1Q16512 942 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 PROSER3Q2NL68 480 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 TREML2Q5T2D2 321 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 C1orf53Q5VUE5 145 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 PRRT2Q7Z6L0 340 aaPredicted RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ADHFE1Q8IWW8 467 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 CRIPAKQ8N1N5 446 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 USP6NLQ92738 828 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ZDHHC16Q969W1 377 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 IRX2Q9BZI1 471 aaPredicted RBP6.32□□□□□ -1.4
CSTF1-207ENST00000498689 COA1Q9GZY4 146 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 MIS18AQ9NYP9 233 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 ABCA12Q86UK0 2595 aa6.32□□□□□ -1.4
CSTF1-207ENST00000498689 KBTBD13C9JR72 458 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 SLC5A1P13866 664 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 MFSD5Q6N075 450 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 DCLK2Q8N568 766 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 GDPD5Q8WTR4 605 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 ASIC4Q96FT7 647 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 CCDC85AQ96PX6 553 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms