RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 SZT2Q5T011 3432 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 MPHOSPH10O00566 681 aaKnown RBP11.96□□□□□ -0.49
RNF8-208ENST00000498460 CYP2B6P20813 491 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 MAPK4P31152 587 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 SHMT1P34896 483 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 ERVK-9P63128 1117 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 ERVK-24P63145 666 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 UBE2Q1Q7Z7E8 422 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.96□□□□□ -0.492e-8■■■■■ 26.9
RNF8-208ENST00000498460 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNF8-208ENST00000498460 TXNRD2Q9NNW7 524 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.49
RNF8-208ENST00000498460 PAK6Q9NQU5 681 aaPredicted RBP11.96□□□□□ -0.49
RNF8-208ENST00000498460 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
RNF8-208ENST00000498460 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
RNF8-208ENST00000498460 COL11A1P12107 1806 aaPredicted RBP11.95□□□□□ -0.5
RNF8-208ENST00000498460 RPTORQ8N122 1335 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 TCRBV5S4A2TA0A5A2 114 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 ATP5JP18859 108 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 Q3C1V9 767 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 LCORLQ8N3X6 602 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 ACER1Q8TDN7 264 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 SOCS4Q8WXH5 440 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 C12orf42Q96LP6 360 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 KIAA1683Q9H0B3 1180 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 ARMT1Q9H993 441 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
RNF8-208ENST00000498460 PARP14Q460N5 1801 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
RNF8-208ENST00000498460 RLFQ13129 1914 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 MBD4O95243 580 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 VCAM1P19320 739 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 ADD2P35612 726 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 CCNA1P78396 465 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 TRIM32Q13049 653 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 SEPT2Q15019 361 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 CATSPERGQ6ZRH7 1159 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 GPR142Q7Z601 462 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 AMOTL1Q8IY63 956 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 PAWRQ96IZ0 340 aaKnown RBP11.94□□□□□ -0.5
RNF8-208ENST00000498460 HAUS7Q99871 368 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 CRISPLD2Q9H0B8 497 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 PORCNQ9H237 461 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 RABGAP1Q9Y3P9 1069 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 MYH4Q9Y623 1939 aa11.94□□□□□ -0.5
RNF8-208ENST00000498460 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
RNF8-208ENST00000498460 EVI5O60447 810 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
RNF8-208ENST00000498460 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
RNF8-208ENST00000498460 RGS2P41220 211 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 EVX2Q03828 476 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 GABPAQ06546 454 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 NECAB2Q7Z6G3 386 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 TRMT44Q8IYL2 757 aaKnown RBP11.93□□□□□ -0.5
RNF8-208ENST00000498460 TRIB2Q92519 343 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 RPAP3Q9H6T3 665 aaPredicted RBP11.93□□□□□ -0.5
RNF8-208ENST00000498460 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
RNF8-208ENST00000498460 PLXNA1Q9UIW2 1896 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 PRKAB2O43741 272 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 CYP2D6P10635 497 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
RNF8-208ENST00000498460 ZKSCAN1P17029 563 aaPredicted RBP11.92□□□□□ -0.5
RNF8-208ENST00000498460 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
RNF8-208ENST00000498460 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 SMCHD1A6NHR9 2005 aa11.92□□□□□ -0.5
RNF8-208ENST00000498460 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNF8-208ENST00000498460 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 MORN1Q5T089 497 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 DIS3LQ8TF46 1054 aaKnown RBP11.91□□□□□ -0.5
RNF8-208ENST00000498460 USP6NLQ92738 828 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
RNF8-208ENST00000498460 APBA2Q99767 749 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms