RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 GTF3C2Q8WUA4 911 aaPredicted RBP19.65■□□□□ 0.74
MUC1-220ENST00000498431 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
MUC1-220ENST00000498431 FLRT1Q9NZU1 646 aa19.65■□□□□ 0.74
MUC1-220ENST00000498431 ATP8B2P98198 1209 aa19.64■□□□□ 0.73
MUC1-220ENST00000498431 TATDN1Q6P1N9 297 aa19.64■□□□□ 0.73
MUC1-220ENST00000498431 CCDC8Q9H0W5 538 aaPredicted RBP19.64■□□□□ 0.73
MUC1-220ENST00000498431 MTMR10Q9NXD2 777 aa19.64■□□□□ 0.73
MUC1-220ENST00000498431 RABGAP1Q9Y3P9 1069 aa19.64■□□□□ 0.73
MUC1-220ENST00000498431 IDH1O75874 414 aaKnown RBP19.63■□□□□ 0.73
MUC1-220ENST00000498431 MDM2Q00987 491 aaPredicted RBP19.63■□□□□ 0.73
MUC1-220ENST00000498431 MAP2K5Q13163 448 aa19.63■□□□□ 0.73
MUC1-220ENST00000498431 ACER1Q8TDN7 264 aa19.63■□□□□ 0.73
MUC1-220ENST00000498431 EAF2Q96CJ1 260 aaPredicted RBP19.63■□□□□ 0.73
MUC1-220ENST00000498431 FEZ1Q99689 392 aa19.63■□□□□ 0.73
MUC1-220ENST00000498431 USP17L15C9J2P7 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L13C9JLJ4 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L11C9JVI0 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L18D6R9N7 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L22D6RA61 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L17D6RBQ6 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L19D6RCP7 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L20D6RJB6 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP5P45974 858 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 USP17L24Q0WX57 530 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 EDC3Q96F86 508 aaKnown RBP19.62■□□□□ 0.73
MUC1-220ENST00000498431 ANTXR1Q9H6X2 564 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
MUC1-220ENST00000498431 BTBD7Q9P203 1132 aa19.62■□□□□ 0.73
MUC1-220ENST00000498431 VCAM1P19320 739 aa19.61■□□□□ 0.73
MUC1-220ENST00000498431 WDR78Q5VTH9 848 aa19.61■□□□□ 0.73
MUC1-220ENST00000498431 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
MUC1-220ENST00000498431 SERPINB13Q9UIV8 391 aa19.61■□□□□ 0.73
MUC1-220ENST00000498431 STXBP5LQ9Y2K9 1186 aa19.61■□□□□ 0.73
MUC1-220ENST00000498431 NOP58Q9Y2X3 529 aaKnown RBP19.61■□□□□ 0.73
MUC1-220ENST00000498431 PTPREP23469 700 aa19.6■□□□□ 0.73
MUC1-220ENST00000498431 ZKSCAN2Q63HK3 967 aa19.6■□□□□ 0.73
MUC1-220ENST00000498431 NPLOC4Q8TAT6 608 aa19.6■□□□□ 0.73
MUC1-220ENST00000498431 KIAA1683Q9H0B3 1180 aa19.6■□□□□ 0.73
MUC1-220ENST00000498431 EHD4Q9H223 541 aa19.6■□□□□ 0.73
MUC1-220ENST00000498431 SLC15A5A6NIM6 579 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 SPDYE16A6NNV3 312 aaPredicted RBP19.59■□□□□ 0.73
MUC1-220ENST00000498431 IGSF3O75054 1194 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 GUCY1A2P33402 732 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 SHMT1P34896 483 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 PLCD1P51178 756 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 CCNA1P78396 465 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 EVX2Q03828 476 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 CERKLQ49MI3 558 aaPredicted RBP19.59■□□□□ 0.73
MUC1-220ENST00000498431 MFSD14CQ5VZR4 134 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 TRPV1Q8NER1 839 aa19.59■□□□□ 0.73
MUC1-220ENST00000498431 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
MUC1-220ENST00000498431 CYP2C19P33261 490 aa19.58■□□□□ 0.72
MUC1-220ENST00000498431 USP14P54578 494 aa19.58■□□□□ 0.72
MUC1-220ENST00000498431 GRB14Q14449 540 aa19.58■□□□□ 0.72
MUC1-220ENST00000498431 LBX2Q6XYB7 198 aa19.58■□□□□ 0.72
MUC1-220ENST00000498431 RPAP3Q9H6T3 665 aaPredicted RBP19.58■□□□□ 0.72
MUC1-220ENST00000498431 DDX20Q9UHI6 824 aaKnown RBP19.58■□□□□ 0.72
MUC1-220ENST00000498431 PRUNE2Q8WUY3 3088 aa19.57■□□□□ 0.72
MUC1-220ENST00000498431 NAV1Q8NEY1 1877 aa19.57■□□□□ 0.72
MUC1-220ENST00000498431 GLRX3O76003 335 aaKnown RBP19.57■□□□□ 0.72
MUC1-220ENST00000498431 HOXC6P09630 235 aa19.57■□□□□ 0.72
MUC1-220ENST00000498431 RLBP1P12271 317 aa19.57■□□□□ 0.72
MUC1-220ENST00000498431 CNGA1P29973 690 aa19.57■□□□□ 0.72
MUC1-220ENST00000498431 ATN1P54259 1190 aaPredicted RBP19.57■□□□□ 0.72
MUC1-220ENST00000498431 RIOK1Q9BRS2 568 aaKnown RBP19.57■□□□□ 0.72
MUC1-220ENST00000498431 VCANP13611 3396 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 IGHA2P01877 340 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 ATP2B2Q01814 1243 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 SEPT2Q15019 361 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 TTC6Q86TZ1 520 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 CERS3Q8IU89 383 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 IVNS1ABPQ9Y6Y0 642 aa19.56■□□□□ 0.72
MUC1-220ENST00000498431 LTBP2Q14767 1821 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 A0A1W2PRG0 241 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 MAP3K12Q12852 859 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 LPAR1Q92633 364 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 RLFQ13129 1914 aa19.55■□□□□ 0.72
MUC1-220ENST00000498431 POTEB2H3BUK9 544 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 CYBAP13498 195 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 GABPAQ06546 454 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 ITPRIPQ8IWB1 547 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 GUCD1Q96NT3 240 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 MOV10L1Q9BXT6 1211 aaKnown RBP19.54■□□□□ 0.72
MUC1-220ENST00000498431 EXOC6BQ9Y2D4 811 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
MUC1-220ENST00000498431 ZNF236Q9UL36 1845 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 DNM1LO00429 736 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 MSCO60682 206 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 RTP1P59025 263 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 KIAA1755Q5JYT7 1200 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 GJC2Q5T442 439 aaPredicted RBP19.53■□□□□ 0.72
MUC1-220ENST00000498431 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 AACSQ86V21 672 aa19.53■□□□□ 0.72
MUC1-220ENST00000498431 CDH23Q9H251 3354 aa19.52■□□□□ 0.72
MUC1-220ENST00000498431 POLR3DP05423 398 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms