RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CFAP53Q96M91 514 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 SPC25Q9HBM1 224 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 C11orf16Q9NQ32 467 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 RNF19AQ9NV58 838 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 IFT57Q9NWB7 429 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 PRKAB1Q9Y478 270 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 NUP98P52948 1817 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 PNMA6FA0A0J9YX94 578 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 CCDC194A0A1B0GVG4 234 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 GPR182O15218 404 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 RNMTO43148 476 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 FZD6O60353 706 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 INPP5BP32019 993 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 IDH3AP50213 366 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 ARSDP51689 593 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 C1orf141Q5JVX7 400 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 MPRIPQ6WCQ1 1025 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 TREML1Q86YW5 311 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 CCAR1Q8IX12 1150 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 MKL1Q969V6 931 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 SLC52A2Q9HAB3 445 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 FAM13BQ9NYF5 915 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 AK5Q9Y6K8 562 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
TMEM39A-212ENST00000497993 ANKRD36CQ5JPF3 1778 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 HTATSF1O43719 755 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 IGHA2P01877 340 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 BMP4P12644 408 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 CD33P20138 364 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 GJA8P48165 433 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 CTBSQ01459 385 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 MTHFSDQ2M296 383 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 TAF7LQ5H9L4 462 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 TMED8Q6PL24 325 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 CCDC136Q96JN2 1154 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 PDGFDQ9GZP0 370 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 IRF2BPLQ9H1B7 796 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 SLKQ9H2G2 1235 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 NUDCQ9Y266 331 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 PCDHGB7Q9Y5F8 929 aa7.54□□□□□ -1.2
TMEM39A-212ENST00000497993 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 SBF1O95248 1867 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 EIF3JO75822 258 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 HMOX1P09601 288 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 SFSWAPQ12872 951 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 ITPK1Q13572 414 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 NIF3L1Q9GZT8 377 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 HCN2Q9UL51 889 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 HEG1Q9ULI3 1381 aa7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 N4BP2Q86UW6 1770 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-212ENST00000497993 DICER1Q9UPY3 1922 aaKnown RBP7.52□□□□□ -1.2
TMEM39A-212ENST00000497993 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 C2CD2LO14523 706 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 OPLAHO14841 1288 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 U2SURPO15042 1029 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 PEX14O75381 377 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 USP5P45974 858 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 INSM1Q01101 510 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 SMC5Q8IY18 1101 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 SETDB2Q96T68 719 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 PRKRIP1Q9H875 184 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.21
TMEM39A-212ENST00000497993 UTRNP46939 3433 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 HMGB1P1B2RPK0 211 aaPredicted RBP7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 ARAFP10398 606 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 EIF4BP23588 611 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 PRKAR2BP31323 418 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 ZAP70P43403 619 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 CABP4P57796 275 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 FAM26DQ5JW98 314 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 IL17REQ8NFR9 667 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 GPRASP2Q96D09 838 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 PHACTR3Q96KR7 559 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 LGR6Q9HBX8 967 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 TFCP2L1Q9NZI6 479 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 GGT7Q9UJ14 662 aa7.51□□□□□ -1.21
TMEM39A-212ENST00000497993 PRR12Q9ULL5 1215 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms