RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 SH2B1Q9NRF2 756 aaPredicted RBP28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 MTMR4Q9NYA4 1195 aa28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 POLR2AP24928 1970 aaKnown RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 MPHOSPH10O00566 681 aaKnown RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 VEGFAP15692 232 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 CCT2P78371 535 aaKnown RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 SEPT2Q15019 361 aa28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 NFXL1Q6ZNB6 911 aa28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 PNMA8AQ86V59 439 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 SULF1Q8IWU6 871 aa28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 GTF3C6Q969F1 213 aa28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 GLIS2Q9BZE0 524 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 NAP1L2Q9ULW6 460 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 GREB1LQ9C091 1923 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-203ENST00000497869 GOLGA8BA8MQT2 603 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 GH2P01242 217 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 ABCB5Q2M3G0 1257 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 TMEM47Q9BQJ4 181 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 FAM217BQ9NTX9 383 aaPredicted RBP28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 ZNF654Q8IZM8 581 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 STX8Q9UNK0 236 aa28.43■■■□□ 2.14
TNFRSF4-203ENST00000497869 CCDC69A6NI79 296 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 TROAPQ12815 778 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 RASGRP2Q7LDG7 609 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 MICU3Q86XE3 530 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 CCDC144CPQ8IYA2 1237 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 SLC12A7Q9Y666 1083 aa28.42■■■□□ 2.14
TNFRSF4-203ENST00000497869 CTDNEP1O95476 244 aa28.41■■■□□ 2.14
TNFRSF4-203ENST00000497869 TMTC2Q8N394 836 aa28.41■■■□□ 2.14
TNFRSF4-203ENST00000497869 SLKQ9H2G2 1235 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-203ENST00000497869 CDC27P30260 824 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 CAP2P40123 477 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 MAP1SQ66K74 1059 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 ZBTB43O43298 467 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 INPP5BP32019 993 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 FMR1Q06787 632 aaKnown RBP eCLIP28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 TMEM179Q6ZVK1 233 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 ZNF112Q9UJU3 913 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 ZBTB21Q9ULJ3 1066 aa28.4■■■□□ 2.14
TNFRSF4-203ENST00000497869 CCDC84Q86UT8 332 aaPredicted RBP28.39■■■□□ 2.14
TNFRSF4-203ENST00000497869 CDCA5Q96FF9 252 aa28.39■■■□□ 2.14
TNFRSF4-203ENST00000497869 ADD1P35611 737 aaKnown RBP28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 CLIP2Q9UDT6 1046 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 CLEC11AQ9Y240 323 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 PPFIA3O75145 1194 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 EEF2P13639 858 aaKnown RBP28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 RAB3GAP1Q15042 981 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 CCDC178Q5BJE1 867 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 LRRC47Q8N1G4 583 aaKnown RBP28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 PNMA1Q8ND90 353 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 CHMP4CQ96CF2 233 aa28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 DAXXQ9UER7 740 aaPredicted RBP28.38■■■□□ 2.13
TNFRSF4-203ENST00000497869 MYH8P13535 1937 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 NID2Q14112 1375 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 JAK2O60674 1132 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 DDIT3P35638 169 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 METAP2P50579 478 aaKnown RBP eCLIP28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 PRKG1Q13976 671 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 NUP133Q8WUM0 1156 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 INTS4Q96HW7 963 aaKnown RBP28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 ZNF341Q9BYN7 854 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 KAT14Q9H8E8 782 aa28.37■■■□□ 2.13
TNFRSF4-203ENST00000497869 A0A1W2PRG0 241 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 GOLGA8AA7E2F4 631 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 TRAF5O00463 557 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 USP2O75604 605 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 TTLL1O95922 423 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 TOP1P11387 765 aaKnown RBP28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 SUPT20HL1Q3ZLR7 823 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 CDC37L1Q7L3B6 337 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 KLRG1Q96E93 195 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 KANSL2Q9H9L4 492 aa28.36■■■□□ 2.13
TNFRSF4-203ENST00000497869 DCAF15Q66K64 600 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 CATIPQ7Z7H3 387 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 ZKSCAN4Q969J2 545 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 ICA1Q05084 483 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 FANCBQ8NB91 859 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 NSUN7Q8NE18 718 aaKnown RBP28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 CABP5Q9NP86 173 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 NYAP2Q9P242 653 aa28.35■■■□□ 2.13
TNFRSF4-203ENST00000497869 DDAH1O94760 285 aa28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 NTRK3Q16288 839 aa28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 CMTR1Q8N1G2 835 aaKnown RBP28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 ACER1Q8TDN7 264 aa28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 MKL1Q969V6 931 aa28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 WRNIP1Q96S55 665 aa28.34■■■□□ 2.13
TNFRSF4-203ENST00000497869 HSP90AA1P07900 732 aaKnown RBP28.33■■■□□ 2.13
TNFRSF4-203ENST00000497869 ECE1P42892 770 aa28.33■■■□□ 2.13
TNFRSF4-203ENST00000497869 ATP2B2Q01814 1243 aa28.33■■■□□ 2.13
TNFRSF4-203ENST00000497869 MOB2Q70IA6 237 aa28.33■■■□□ 2.13
TNFRSF4-203ENST00000497869 MTMR7Q9Y216 660 aa28.33■■■□□ 2.13
TNFRSF4-203ENST00000497869 CTNND1O60716 968 aaKnown RBP28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 RCAN1P53805 252 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 SYNE3Q6ZMZ3 975 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 LDHDQ86WU2 507 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 RTN1Q16799 776 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 SMARCC2Q8TAQ2 1214 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 HOOK2Q96ED9 719 aa28.32■■■□□ 2.12
TNFRSF4-203ENST00000497869 UBE2Q2LH0YL09 131 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms