RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 USP17L11C9JVI0 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L18D6R9N7 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L22D6RA61 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L17D6RBQ6 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L19D6RCP7 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L20D6RJB6 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 IDH1O75874 414 aaKnown RBP26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP17L24Q0WX57 530 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 ZYXQ15942 572 aaKnown RBP26.56■■□□□ 1.84
CLIC4-204ENST00000497755 APBA2Q99767 749 aa26.56■■□□□ 1.84
CLIC4-204ENST00000497755 USP5P45974 858 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 MAP2K5Q13163 448 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 CATSPERGQ6ZRH7 1159 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 TDHQ8IZJ6 230 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 DEFB123Q8N688 67 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 MAGEB6Q8N7X4 407 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 SERPINB13Q9UIV8 391 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 NDUFB9Q9Y6M9 179 aa26.55■■□□□ 1.84
CLIC4-204ENST00000497755 LRRC26Q2I0M4 334 aa26.54■■□□□ 1.84
CLIC4-204ENST00000497755 EDC3Q96F86 508 aaKnown RBP26.54■■□□□ 1.84
CLIC4-204ENST00000497755 UBE2OQ9C0C9 1292 aaKnown RBP26.54■■□□□ 1.84
CLIC4-204ENST00000497755 EHD4Q9H223 541 aa26.54■■□□□ 1.84
CLIC4-204ENST00000497755 CUL9Q8IWT3 2517 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 RAB3GAP1Q15042 981 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 Q7L0L9 218 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 CERS3Q8IU89 383 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 ACER1Q8TDN7 264 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 FEZ1Q99689 392 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 KIAA1683Q9H0B3 1180 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 ANTXR1Q9H6X2 564 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 FLRT1Q9NZU1 646 aa26.53■■□□□ 1.84
CLIC4-204ENST00000497755 CCNA1P78396 465 aa26.52■■□□□ 1.84
CLIC4-204ENST00000497755 CERKLQ49MI3 558 aaPredicted RBP26.52■■□□□ 1.84
CLIC4-204ENST00000497755 CWC22Q9HCG8 908 aaKnown RBP26.52■■□□□ 1.84
CLIC4-204ENST00000497755 GLRX3O76003 335 aaKnown RBP26.51■■□□□ 1.83
CLIC4-204ENST00000497755 VCAM1P19320 739 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 PTPREP23469 700 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 USP14P54578 494 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 ABCB5Q2M3G0 1257 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 TTC6Q86TZ1 520 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 BTBD7Q9P203 1132 aa26.51■■□□□ 1.83
CLIC4-204ENST00000497755 LAMA2P24043 3122 aaKnown RBP26.51■■□□□ 1.83
CLIC4-204ENST00000497755 SLC15A5A6NIM6 579 aa26.5■■□□□ 1.83
CLIC4-204ENST00000497755 PLCD1P51178 756 aa26.5■■□□□ 1.83
CLIC4-204ENST00000497755 LBX2Q6XYB7 198 aa26.5■■□□□ 1.83
CLIC4-204ENST00000497755 RLBP1P12271 317 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 GUCY1A2P33402 732 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 SHMT1P34896 483 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 MAP3K12Q12852 859 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 WDR78Q5VTH9 848 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 MFSD14CQ5VZR4 134 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 MTMR10Q9NXD2 777 aa26.49■■□□□ 1.83
CLIC4-204ENST00000497755 HOXC6P09630 235 aa26.48■■□□□ 1.83
CLIC4-204ENST00000497755 TMED8Q6PL24 325 aaPredicted RBP26.48■■□□□ 1.83
CLIC4-204ENST00000497755 RIOK1Q9BRS2 568 aaKnown RBP26.48■■□□□ 1.83
CLIC4-204ENST00000497755 CABP5Q9NP86 173 aa26.48■■□□□ 1.83
CLIC4-204ENST00000497755 MDM2Q00987 491 aaPredicted RBP26.47■■□□□ 1.83
CLIC4-204ENST00000497755 ITPRIPQ8IWB1 547 aa26.47■■□□□ 1.83
CLIC4-204ENST00000497755 NPLOC4Q8TAT6 608 aa26.47■■□□□ 1.83
CLIC4-204ENST00000497755 SENP6Q9GZR1 1112 aaPredicted RBP26.47■■□□□ 1.83
CLIC4-204ENST00000497755 RPAP3Q9H6T3 665 aaPredicted RBP26.47■■□□□ 1.83
CLIC4-204ENST00000497755 STXBP5LQ9Y2K9 1186 aa26.47■■□□□ 1.83
CLIC4-204ENST00000497755 SPDYE16A6NNV3 312 aaPredicted RBP26.46■■□□□ 1.83
CLIC4-204ENST00000497755 IGHA2P01877 340 aa26.46■■□□□ 1.83
CLIC4-204ENST00000497755 ATP2B2Q01814 1243 aa26.46■■□□□ 1.83
CLIC4-204ENST00000497755 GRB14Q14449 540 aa26.46■■□□□ 1.83
CLIC4-204ENST00000497755 FTSJ3Q8IY81 847 aaKnown RBP26.46■■□□□ 1.83
CLIC4-204ENST00000497755 DDX20Q9UHI6 824 aaKnown RBP26.46■■□□□ 1.83
CLIC4-204ENST00000497755 FRMPD3Q5JV73 1810 aa26.45■■□□□ 1.82
CLIC4-204ENST00000497755 GABPAQ06546 454 aa26.45■■□□□ 1.82
CLIC4-204ENST00000497755 CEP85Q6P2H3 762 aa26.45■■□□□ 1.82
CLIC4-204ENST00000497755 CYP2C19P33261 490 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 SEPT2Q15019 361 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 AACSQ86V21 672 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 TRPV1Q8NER1 839 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 LPAR1Q92633 364 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 EXOC6BQ9Y2D4 811 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 IVNS1ABPQ9Y6Y0 642 aa26.44■■□□□ 1.82
CLIC4-204ENST00000497755 UNC80Q8N2C7 3258 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 MAGEB6P1A0A0J9YX57 407 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 A0A1W2PRG0 241 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 MSCO60682 206 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 POLR3DP05423 398 aaPredicted RBP26.43■■□□□ 1.82
CLIC4-204ENST00000497755 CNGA1P29973 690 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 EVX2Q03828 476 aa26.43■■□□□ 1.82
CLIC4-204ENST00000497755 ATN1P54259 1190 aaPredicted RBP26.41■■□□□ 1.82
CLIC4-204ENST00000497755 COG2Q14746 738 aa26.41■■□□□ 1.82
CLIC4-204ENST00000497755 ERC1Q8IUD2 1116 aa26.41■■□□□ 1.82
CLIC4-204ENST00000497755 MOV10L1Q9BXT6 1211 aaKnown RBP26.41■■□□□ 1.82
CLIC4-204ENST00000497755 HOXC10Q9NYD6 342 aa26.41■■□□□ 1.82
CLIC4-204ENST00000497755 DNM1LO00429 736 aa26.4■■□□□ 1.82
CLIC4-204ENST00000497755 SLC9C2Q5TAH2 1124 aa26.4■■□□□ 1.82
CLIC4-204ENST00000497755 MCM9Q9NXL9 1143 aa26.4■■□□□ 1.82
CLIC4-204ENST00000497755 POTEB2H3BUK9 544 aa26.39■■□□□ 1.82
CLIC4-204ENST00000497755 CYBAP13498 195 aa26.39■■□□□ 1.82
CLIC4-204ENST00000497755 PDE6AP16499 860 aa26.39■■□□□ 1.82
CLIC4-204ENST00000497755 TTF1Q15361 905 aaPredicted RBP26.39■■□□□ 1.82
CLIC4-204ENST00000497755 DPP9Q86TI2 863 aa26.39■■□□□ 1.82
CLIC4-204ENST00000497755 CRNKL1Q9BZJ0 848 aaKnown RBP26.39■■□□□ 1.82
CLIC4-204ENST00000497755 IL1RAPL2Q9NP60 686 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms