RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 M0R2C6 588 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 GNAT2P19087 354 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 OSBPP22059 807 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 EVI5LQ96CN4 794 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 SEC62Q99442 399 aaKnown RBP13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 MGAMO43451 1857 aa13.1□□□□□ -0.31
SHROOM3-210ENST00000497440 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 RLFQ13129 1914 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 GREB1LQ9C091 1923 aaPredicted RBP13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 USP14P54578 494 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 IRF5Q13568 498 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 KIF22Q14807 665 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 SEPT2Q15019 361 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
SHROOM3-210ENST00000497440 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 AKR1B1P15121 316 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 HOXD10P28358 340 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 HERVK_113P62684 666 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 FGRP09769 529 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 VCAM1P19320 739 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 RASA1P20936 1047 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 FCGRTP55899 365 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 ALX1Q15699 326 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 Q3C1V9 767 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 ANKRD13CQ8N6S4 541 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 PXYLP1Q8TE99 480 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 USP6NLQ92738 828 aa13.07□□□□□ -0.32
SHROOM3-210ENST00000497440 CNMDO75829 334 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 IGHA2P01877 340 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 NOVP48745 357 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 PRKCZQ05513 592 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 LPAR1Q92633 364 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 MKL1Q969V6 931 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 DDRGK1Q96HY6 314 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 ANAPC4Q9UJX5 808 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 GABRQQ9UN88 632 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 ADAMTS5Q9UNA0 930 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 RANBP2P49792 3224 aaKnown RBP13.06□□□□□ -0.32
SHROOM3-210ENST00000497440 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 FLT3LGP49771 235 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 SOX10P56693 466 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 FSD1Q9BTV5 496 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
SHROOM3-210ENST00000497440 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 MYH8P13535 1937 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 GRK4P32298 578 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 ERVK-24P63145 666 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 AMOTL1Q8IY63 956 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 ZMYM6O95789 1325 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
SHROOM3-210ENST00000497440 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
SHROOM3-210ENST00000497440 TNPO2O14787 897 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms