RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ATE1O95260 518 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 SLFN14P0C7P3 912 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 SOX9P48436 509 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 TTLL4Q14679 1199 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 NKAPLQ5M9Q1 402 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 ISL2Q96A47 359 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 GPRASP2Q96D09 838 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 PSMG3-AS1Q96PY0 264 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 PSMD1Q99460 953 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 WNT10AQ9GZT5 417 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 ATXN3LQ9H3M9 355 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 SEMA6CQ9H3T2 930 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 CCSER2Q9H7U1 834 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 EHMT1Q9H9B1 1298 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 FBRSQ9HAH7 460 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 BRMS1Q9HCU9 246 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 RAD18Q9NS91 495 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 JCADQ9P266 1359 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 BLMP54132 1417 aaPredicted RBP5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 WDR97A6NE52 1622 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 FANCGO15287 622 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 ASPAP45381 313 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 APOBRQ0VD83 1088 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 RSPO4Q2I0M5 234 aaPredicted RBP5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 DYMQ7RTS9 669 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 HDXQ7Z353 690 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 SLC43A3Q8NBI5 491 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 DHX38Q92620 1227 aaKnown RBP5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 GATA6Q92908 595 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 GMLQ99445 158 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 TANGO6Q9C0B7 1094 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 GINM1Q9NU53 330 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 FAM135BQ49AJ0 1406 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 FANCAO15360 1455 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 SCAF11Q99590 1463 aaKnown RBP5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 ABCC8Q09428 1581 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 CACNA1GO43497 2377 aa5.12□□□□□ -1.59
EXOSC3-208ENST00000496910 TLDC2A0PJX2 215 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 PRAMEF27A3QJZ7 478 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 FAM83GA6ND36 823 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 GRIN3BO60391 1043 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 HTR3BO95264 441 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 FGRP09769 529 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 BMP3P12645 472 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 HCLS1P14317 486 aaPredicted RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 ATF4P18848 351 aaPredicted RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 GRK4P32298 578 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 CAP2P40123 477 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 CLCQ05315 142 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 NKG7Q16617 165 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 SEZ6Q53EL9 994 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 TMEM201Q5SNT2 666 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 EGFLAMQ63HQ2 1017 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 REXO1Q8N1G1 1221 aaKnown RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 FBLIM1Q8WUP2 373 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 UTP4Q969X6 686 aaKnown RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 ELMO3Q96BJ8 720 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 ACSF2Q96CM8 615 aaPredicted RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 C1GALT1Q9NS00 363 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 SLC52A1Q9NWF4 448 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 SUGT1Q9Y2Z0 365 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 RIPOR2Q9Y4F9 1068 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 CARMIL2Q6F5E8 1435 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 ABCC2Q92887 1545 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 DCAF1Q9Y4B6 1507 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 MROH2BQ7Z745 1585 aa5.11□□□□□ -1.59
EXOSC3-208ENST00000496910 LOC102724159A0A0B4J2E5 919 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 NFICP08651 508 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 HSPA1AP0DMV8 641 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 HSPA1BP0DMV9 641 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 LMNB1P20700 586 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 ITGB7P26010 798 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 MAP4P27816 1152 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 AFF2P51816 1311 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 DOC2BQ14184 412 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 PWP2Q15269 919 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 CWF19L2Q2TBE0 894 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 CCDC144BQ3MJ40 725 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 PRR23CQ6ZRP0 262 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 SMYD4Q8IYR2 804 aaPredicted RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 SHISA5Q8N114 240 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 ZNF526Q8TF50 670 aaPredicted RBP5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 NKD1Q969G9 470 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 TP53INP1Q96A56 240 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 WDR90Q96KV7 1748 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 PIF1Q9H611 641 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 TJP2Q9UDY2 1190 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 KDM5BQ9UGL1 1544 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 ADAM30Q9UKF2 790 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 ZNRF3Q9ULT6 936 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 INPP5FQ9Y2H2 1132 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 PCDHB14Q9Y5E9 798 aa5.1□□□□□ -1.59
EXOSC3-208ENST00000496910 PBRM1Q86U86 1689 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 POLA1P09884 1462 aaPredicted RBP5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 CD109Q6YHK3 1445 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 MEIS3P2A8K0S8 358 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms