RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 USP17L12C9JPN9 530 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 USP17L21D6R901 530 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
UBXN11-216ENST00000496466 SERPINC1P01008 464 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 SERTAD1Q9UHV2 236 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 TRPC5Q9UL62 973 aaPredicted RBP17.11■□□□□ 0.33
UBXN11-216ENST00000496466 CEP131Q9UPN4 1083 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
UBXN11-216ENST00000496466 MYO1BO43795 1136 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 KCNJ6P48051 423 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 FUT2Q10981 343 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 GRAPQ13588 217 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 POSTNQ15063 836 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 PKN1Q16512 942 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-216ENST00000496466 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 ATP2B1P20020 1258 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 AKAP17AQ02040 695 aaKnown RBP17.1■□□□□ 0.33
UBXN11-216ENST00000496466 PRR5LQ6MZQ0 368 aa17.1■□□□□ 0.33
UBXN11-216ENST00000496466 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 FGRP09769 529 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 NAA30Q147X3 362 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 NT5DC1Q5TFE4 455 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 PPP1R13BQ96KQ4 1090 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 PRPF3O43395 683 aaKnown RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 IFIT1BQ5T764 474 aaKnown RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 KIF18AQ8NI77 898 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
UBXN11-216ENST00000496466 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-216ENST00000496466 FAM205CA6NFA0 338 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 NRDCO43847 1150 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 XBP1P17861 261 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 VSTM4Q8IW00 320 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 CRNKL1Q9BZJ0 848 aaKnown RBP17.08■□□□□ 0.33
UBXN11-216ENST00000496466 CSRNP2Q9H175 543 aa17.08■□□□□ 0.33
UBXN11-216ENST00000496466 ACTN4O43707 911 aaKnown RBP17.08■□□□□ 0.32
UBXN11-216ENST00000496466 CYP2D6P10635 497 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 MORC3Q14149 939 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
UBXN11-216ENST00000496466 MORC2Q9Y6X9 1032 aaPredicted RBP17.08■□□□□ 0.32
UBXN11-216ENST00000496466 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 PCP11498 1178 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 GYS1P13807 737 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 ADRA2BP18089 450 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 KRT2P35908 639 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 TROAPQ12815 778 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 RBM28Q9NW13 759 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 TRIM75PA6NK02 468 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 PDILTQ8N807 584 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBXN11-216ENST00000496466 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
UBXN11-216ENST00000496466 CALM1P0DP23 149 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 CALM2P0DP24 149 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 CALM3P0DP25 149 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBXN11-216ENST00000496466 GRIK5Q16478 980 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
UBXN11-216ENST00000496466 TMX1Q9H3N1 280 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 INTS13Q9NVM9 706 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 XDHP47989 1333 aa17.06■□□□□ 0.32
UBXN11-216ENST00000496466 NMT2O60551 498 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 GPSM2P81274 684 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 TRIML1Q8N9V2 468 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 DACH1Q9UI36 760 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
UBXN11-216ENST00000496466 DDAH1O94760 285 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 SERPINB2P05120 415 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
UBXN11-216ENST00000496466 PTPN21Q16825 1174 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
UBXN11-216ENST00000496466 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
UBXN11-216ENST00000496466 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms