RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TMEM47Q9BQJ4 181 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 ZNF277Q9NRM2 450 aaPredicted RBP15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 POLR3EQ9NVU0 708 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 SERPINA10Q9UK55 444 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 CDK5RAP2Q96SN8 1893 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 ADAMTSL1Q8N6G6 1762 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 NASPP49321 788 aaPredicted RBP15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 CACNB3P54284 484 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 BTBD18B2RXH4 712 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 NOVP48745 357 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 TGFB2P61812 414 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 MAP3K14Q99558 947 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 MTFR1LQ9H019 292 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 STX8Q9UNK0 236 aa15.83■□□□□ 0.13
SPTBN1-205ENST00000496323 COL4A5P29400 1685 aa15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 DIS3L2Q8IYB7 885 aaKnown RBP15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 STAG2Q8N3U4 1231 aa15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 DACT1Q9NYF0 836 aa15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 FAM198AQ9UFP1 575 aa15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 ZNF646O15015 1829 aaPredicted RBP15.83■□□□□ 0.12
SPTBN1-205ENST00000496323 NR1I2O75469 434 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 YEATS4O95619 227 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 RBM5P52756 815 aaKnown RBP eCLIP15.82■□□□□ 0.122e-10■■■■□ 20.1
SPTBN1-205ENST00000496323 AKAP17AQ02040 695 aaKnown RBP15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 GRM4Q14833 912 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 BICD2Q8TD16 824 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 CEP95Q96GE4 821 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 VPS54Q9P1Q0 977 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 MAD2L2Q9UI95 211 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 PCDHA7Q9UN72 937 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 KIF5BP33176 963 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 SLC35G1Q2M3R5 365 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 NOSTRINQ8IVI9 506 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 OXER1Q8TDS5 423 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 IDI2Q9BXS1 227 aa15.82■□□□□ 0.12
SPTBN1-205ENST00000496323 AKR1B1P15121 316 aa15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 POLD1P28340 1107 aa15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 SHMT1P34896 483 aa15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 ME1P48163 572 aa15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 GNL2Q13823 731 aaKnown RBP15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 R3HDM1Q15032 1099 aaKnown RBP15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 FOXP1Q9H334 677 aaPredicted RBP15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
SPTBN1-205ENST00000496323 RAD17O75943 681 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 LETM1O95202 739 aaPredicted RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 TCP10Q12799 353 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 NR5A1Q13285 461 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 STK38Q15208 465 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 SH3BP5LQ7L8J4 393 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 RASGRP2Q7LDG7 609 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 PHF20Q9BVI0 1012 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 PLIN4Q96Q06 1357 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 ECM29Q5VYK3 1845 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 IGKV6D-41A0A0C4DH26 115 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 PSMD14O00487 310 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 SPTLC2O15270 562 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 VIL1P09327 827 aaKnown RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 CFAP100Q494V2 611 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 CCAR1Q8IX12 1150 aaKnown RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 KCNG4Q8TDN1 519 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 PRMT6Q96LA8 375 aaPredicted RBP15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 GMLQ99445 158 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 SWAP70Q9UH65 585 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
SPTBN1-205ENST00000496323 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 PALM3A6NDB9 673 aaPredicted RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 DDTLA6NHG4 134 aaPredicted RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 TOB1P50616 345 aaPredicted RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 PTPAQ15257 358 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 NPY5RQ15761 445 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 CAMK4Q16566 473 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 SGIP1Q9BQI5 828 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 FUCA2Q9BTY2 467 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 EHD4Q9H223 541 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 TDRD3Q9H7E2 651 aaKnown RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 MTMR4Q9NYA4 1195 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 CYTH3O43739 400 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 SNW1Q13573 536 aaKnown RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 PFKFB3Q16875 520 aaPredicted RBP15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 ADALQ6DHV7 355 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 PIBF1Q8WXW3 757 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 NUP62CLQ9H1M0 184 aa15.79■□□□□ 0.12
SPTBN1-205ENST00000496323 DDX19AQ9NUU7 478 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms