RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CST3P01034 146 aaPredicted RBP6.58□□□□□ -1.36
CLK1-214ENST00000496205 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
CLK1-214ENST00000496205 HID1Q8IV36 788 aa6.58□□□□□ -1.36
CLK1-214ENST00000496205 ANKRD24Q8TF21 1146 aa6.58□□□□□ -1.36
CLK1-214ENST00000496205 DCTN4Q9UJW0 460 aa6.58□□□□□ -1.36
CLK1-214ENST00000496205 PATL2C9JE40 543 aaKnown RBP6.57□□□□□ -1.36
CLK1-214ENST00000496205 RNF32Q9H0A6 362 aa6.57□□□□□ -1.36
CLK1-214ENST00000496205 C19orf44Q9H6X5 657 aa6.57□□□□□ -1.36
CLK1-214ENST00000496205 SRFP11831 508 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 GRK4P32298 578 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 KIR3DL1P43629 444 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
CLK1-214ENST00000496205 ZNF746Q6NUN9 644 aaPredicted RBP6.56□□□□□ -1.36
CLK1-214ENST00000496205 TMPRSS7Q7RTY8 843 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 CREG2Q8IUH2 290 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 Q96M66 194 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 SRCIN1Q9C0H9 1055 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 DUSP15Q9H1R2 295 aaPredicted RBP6.56□□□□□ -1.36
CLK1-214ENST00000496205 SNCAIPQ9Y6H5 919 aa6.56□□□□□ -1.36
CLK1-214ENST00000496205 MYOCOSA0A1B0GUC4 107 aa6.55□□□□□ -1.36
CLK1-214ENST00000496205 ZNF428Q96B54 188 aa6.55□□□□□ -1.36
CLK1-214ENST00000496205 DPH2Q9BQC3 489 aaPredicted RBP6.55□□□□□ -1.36
CLK1-214ENST00000496205 MCOLN1Q9GZU1 580 aa6.55□□□□□ -1.36
CLK1-214ENST00000496205 PARD6AQ9NPB6 346 aa6.55□□□□□ -1.36
CLK1-214ENST00000496205 WWC3Q9ULE0 1092 aa6.55□□□□□ -1.36
CLK1-214ENST00000496205 GFRA2O00451 464 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 CYP7A1P22680 504 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 GAB4Q2WGN9 574 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 TIGD5Q53EQ6 642 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 PIWIL2Q8TC59 973 aaKnown RBP6.54□□□□□ -1.36
CLK1-214ENST00000496205 RELTQ969Z4 430 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 BIN2Q9UBW5 565 aaPredicted RBP6.54□□□□□ -1.36
CLK1-214ENST00000496205 JAG2Q9Y219 1238 aa6.54□□□□□ -1.36
CLK1-214ENST00000496205 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
CLK1-214ENST00000496205 BMP7P18075 431 aa6.53□□□□□ -1.36
CLK1-214ENST00000496205 TPP2P29144 1249 aaPredicted RBP6.53□□□□□ -1.36
CLK1-214ENST00000496205 DLG4P78352 724 aa6.53□□□□□ -1.36
CLK1-214ENST00000496205 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
CLK1-214ENST00000496205 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
CLK1-214ENST00000496205 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
CLK1-214ENST00000496205 ZGLP1P0C6A0 271 aa6.52□□□□□ -1.37
CLK1-214ENST00000496205 MAPK1P28482 360 aa6.52□□□□□ -1.37
CLK1-214ENST00000496205 MAPK8P45983 427 aa6.52□□□□□ -1.37
CLK1-214ENST00000496205 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
CLK1-214ENST00000496205 NPM2Q86SE8 214 aaKnown RBP6.52□□□□□ -1.37
CLK1-214ENST00000496205 BAHD1Q8TBE0 780 aaPredicted RBP6.52□□□□□ -1.37
CLK1-214ENST00000496205 PCDHB5Q9Y5E4 795 aa6.52□□□□□ -1.37
CLK1-214ENST00000496205 GIPC1O14908 333 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 TTBK2Q6IQ55 1244 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 ZNF605Q86T29 641 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
CLK1-214ENST00000496205 PDZD8Q8NEN9 1154 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 ZCCHC4Q9H5U6 513 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 GCM1Q9NP62 436 aa6.51□□□□□ -1.37
CLK1-214ENST00000496205 FOXD2O60548 495 aaPredicted RBP6.5□□□□□ -1.37
CLK1-214ENST00000496205 SEPT6Q14141 434 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 DNAJC14Q6Y2X3 702 aaPredicted RBP6.5□□□□□ -1.37
CLK1-214ENST00000496205 SV2BQ7L1I2 683 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 IRF2BP1Q8IU81 584 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 KCNC2Q96PR1 638 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 SGPP1Q9BX95 441 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
CLK1-214ENST00000496205 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLK1-214ENST00000496205 EGR3Q06889 387 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 PPP1R13LQ8WUF5 828 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 TMEM87BQ96K49 555 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 SLC6A17Q9H1V8 727 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 FAM8A1Q9UBU6 413 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 EBF1Q9UH73 591 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
CLK1-214ENST00000496205 PEX10O60683 326 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 PGRP06401 933 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 ETV3P41162 512 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 SLC6A19Q695T7 634 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 LILRA2Q8N149 483 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 INTS4Q96HW7 963 aaKnown RBP6.48□□□□□ -1.37
CLK1-214ENST00000496205 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
CLK1-214ENST00000496205 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
CLK1-214ENST00000496205 YBX2Q9Y2T7 364 aaKnown RBP6.48□□□□□ -1.37
CLK1-214ENST00000496205 ADAMTS20P59510 1910 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 TRIM13O60858 407 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 SEMA7AO75326 666 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 GALK1P51570 392 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 ALG1LQ6GMV1 187 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 TSPYL5Q86VY4 417 aaPredicted RBP6.47□□□□□ -1.37
CLK1-214ENST00000496205 OXR1Q8N573 874 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 MARCH10Q8NA82 808 aaPredicted RBP6.47□□□□□ -1.37
CLK1-214ENST00000496205 SHISA4Q96DD7 197 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 TRIT1Q9H3H1 467 aaKnown RBP6.47□□□□□ -1.37
CLK1-214ENST00000496205 GPATCH2Q9NW75 528 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 CNOT6Q9ULM6 557 aaKnown RBP6.47□□□□□ -1.37
CLK1-214ENST00000496205 TTF2Q9UNY4 1162 aaKnown RBP6.47□□□□□ -1.37
CLK1-214ENST00000496205 SPG7Q9UQ90 795 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 TACC3Q9Y6A5 838 aa6.47□□□□□ -1.37
CLK1-214ENST00000496205 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms