RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 CXCL11O14625 94 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 IRF6O14896 467 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 CETPP11597 493 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 ATP2B2Q01814 1243 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 ICA1Q05084 483 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 TRDNQ13061 729 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
PRPF3-207ENST00000496202 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 DNAJC5GQ8N7S2 189 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 BEGAINQ9BUH8 593 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 CNNM2Q9H8M5 875 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
PRPF3-207ENST00000496202 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 CCL15-CCL14A0A0B4J2E2 113 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 INHBEP58166 350 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 JAG1P78504 1218 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 TFAP4Q01664 338 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 MAP2K1Q02750 393 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-207ENST00000496202 SPP2Q13103 211 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 CCL15Q16663 113 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 FAM47AQ5JRC9 791 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 OTUD7BQ6GQQ9 843 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
PRPF3-207ENST00000496202 ESR2Q92731 530 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 WDR18Q9BV38 432 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 KRT23Q9C075 422 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 KCNH4Q9UQ05 1017 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
PRPF3-207ENST00000496202 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-207ENST00000496202 PLIN4Q96Q06 1357 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 NEDD4P46934 1319 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 CYP21A2P08686 494 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 ZKSCAN1P17029 563 aaPredicted RBP11.42□□□□□ -0.58
PRPF3-207ENST00000496202 MCCP23508 829 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 NT5C2P49902 561 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 USP14P54578 494 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 MTMR2Q13614 643 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 ZYXQ15942 572 aaKnown RBP11.42□□□□□ -0.58
PRPF3-207ENST00000496202 CREB3L3Q68CJ9 461 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 CLEC10AQ8IUN9 316 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 ZIC5Q96T25 663 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
PRPF3-207ENST00000496202 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
PRPF3-207ENST00000496202 B4E1Z4 1266 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 C19orf81C9J6K1 198 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 SLC27A2O14975 620 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 RAD21O60216 631 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 FGRP09769 529 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 HMGCS2P54868 508 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 FASTKD5Q7L8L6 764 aaKnown RBP11.41□□□□□ -0.58
PRPF3-207ENST00000496202 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
PRPF3-207ENST00000496202 IQCA1Q86XH1 822 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
PRPF3-207ENST00000496202 E7EWF7 191 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 KDM4AO75164 1064 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 TTLL1O95922 423 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 ALDH1A1P00352 501 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
PRPF3-207ENST00000496202 BACE1P56817 501 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 KRT32Q14532 448 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-207ENST00000496202 NCOA7Q8NI08 942 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
PRPF3-207ENST00000496202 EPB41L2O43491 1005 aaKnown RBP11.39□□□□□ -0.59
PRPF3-207ENST00000496202 CA12O43570 354 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 TM4SF4P48230 202 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF3-207ENST00000496202 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
PRPF3-207ENST00000496202 NECTIN1Q15223 517 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF3-207ENST00000496202 CLIP2Q9UDT6 1046 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
PRPF3-207ENST00000496202 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
PRPF3-207ENST00000496202 IGKV6D-41A0A0C4DH26 115 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms