RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 MYH7P12883 1935 aa20.46■□□□□ 0.87
APOBEC3A-204ENST00000495988 USP17L15C9J2P7 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L13C9JLJ4 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L11C9JVI0 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L18D6R9N7 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L22D6RA61 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L17D6RBQ6 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L19D6RCP7 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L20D6RJB6 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 PRKAB2O43741 272 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 CYP2D6P10635 497 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 ERVK-24P63145 666 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L24Q0WX57 530 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 SEPT2Q15019 361 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 PLXNB2O15031 1838 aa20.45■□□□□ 0.86
APOBEC3A-204ENST00000495988 FARP2O94887 1054 aaPredicted RBP20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 CHGBP05060 677 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 VCAM1P19320 739 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 MAPK4P31152 587 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 UBE3CQ15386 1083 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 Q3C1V9 767 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 ZSCAN25Q6NSZ9 544 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 UBE2Q1Q7Z7E8 422 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 DPF3Q92784 378 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 PAK6Q9NQU5 681 aaPredicted RBP20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 ATP8A2Q9NTI2 1148 aa20.44■□□□□ 0.86
APOBEC3A-204ENST00000495988 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 TFRCP02786 760 aaKnown RBP20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 CYP2B6P20813 491 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 CATSPERGQ6ZRH7 1159 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 DYNLL2Q96FJ2 89 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 PORCNQ9H237 461 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 DCTPP1Q9H773 170 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 ECHDC1Q9NTX5 307 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 SWAP70Q9UH65 585 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 MYH8P13535 1937 aa20.43■□□□□ 0.86
APOBEC3A-204ENST00000495988 CAPN2P17655 700 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 HABP4Q5JVS0 413 aaKnown RBP20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 POTEEQ6S8J3 1075 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 DDRGK1Q96HY6 314 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 CWC22Q9HCG8 908 aaKnown RBP20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 RABGAP1Q9Y3P9 1069 aa20.42■□□□□ 0.86
APOBEC3A-204ENST00000495988 H0YGN5 161 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 TRIM32Q13049 653 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 TMEM179Q6ZVK1 233 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 PLEKHH3Q7Z736 793 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 TRIB2Q92519 343 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 GPATCH3Q96I76 525 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 RPAP3Q9H6T3 665 aaPredicted RBP20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
APOBEC3A-204ENST00000495988 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 A0A1W2PRG0 241 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L12C9JPN9 530 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 USP17L21D6R901 530 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 CNMDO75829 334 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 CCNA1P78396 465 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 C12orf60Q5U649 245 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 RPTORQ8N122 1335 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 CRISPLD2Q9H0B8 497 aa20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 PUS7LQ9H0K6 701 aaKnown RBP20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 HMX1Q9NP08 348 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3A-204ENST00000495988 XRCC5P13010 732 aaKnown RBP20.39■□□□□ 0.85
APOBEC3A-204ENST00000495988 LBX2Q6XYB7 198 aa20.39■□□□□ 0.85
APOBEC3A-204ENST00000495988 SPDYE16A6NNV3 312 aaPredicted RBP20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 AKR1B1P15121 316 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 RGS2P41220 211 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 CDK8P49336 464 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 MORN1Q5T089 497 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 WDR78Q5VTH9 848 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 TSHZ3Q63HK5 1081 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 USP6NLQ92738 828 aa20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 COLQQ9Y215 455 aaPredicted RBP20.38■□□□□ 0.85
APOBEC3A-204ENST00000495988 GLRX3O76003 335 aaKnown RBP20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 ZKSCAN1P17029 563 aaPredicted RBP20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 ICA1Q05084 483 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 CLEC10AQ8IUN9 316 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 KBTBD3Q8NAB2 608 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 ARHGEF10LQ9HCE6 1279 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 BTBD7Q9P203 1132 aa20.37■□□□□ 0.85
APOBEC3A-204ENST00000495988 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 COG2Q14746 738 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 CCL14Q16627 93 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 MAP3K21Q5TCX8 1036 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 CTR9Q6PD62 1173 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 PAWRQ96IZ0 340 aaKnown RBP20.36■□□□□ 0.85
APOBEC3A-204ENST00000495988 APBA2Q99767 749 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms