RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 DOCK3Q8IZD9 2030 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L15C9J2P7 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L13C9JLJ4 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L11C9JVI0 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L18D6R9N7 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L22D6RA61 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L17D6RBQ6 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L19D6RCP7 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L20D6RJB6 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 EN2P19622 333 aaPredicted RBP29.12■■■□□ 2.25
HLA-C-209ENST00000495835 GUCY1A2P33402 732 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L24Q0WX57 530 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 TMEM179Q6ZVK1 233 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 APPBP2Q92624 585 aa29.12■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L12C9JPN9 530 aa29.11■■■□□ 2.25
HLA-C-209ENST00000495835 USP17L21D6R901 530 aa29.11■■■□□ 2.25
HLA-C-209ENST00000495835 RNF113AO15541 343 aaKnown RBP29.11■■■□□ 2.25
HLA-C-209ENST00000495835 CAPN2P17655 700 aa29.11■■■□□ 2.25
HLA-C-209ENST00000495835 GPRC5AQ8NFJ5 357 aa29.11■■■□□ 2.25
HLA-C-209ENST00000495835 NKX2-3Q8TAU0 364 aa29.11■■■□□ 2.25
HLA-C-209ENST00000495835 STRBPQ96SI9 672 aaKnown RBP29.11■■■□□ 2.25
HLA-C-209ENST00000495835 ADCY3O60266 1144 aa29.1■■■□□ 2.25
HLA-C-209ENST00000495835 CHGBP05060 677 aa29.1■■■□□ 2.25
HLA-C-209ENST00000495835 SEPT2Q15019 361 aa29.1■■■□□ 2.25
HLA-C-209ENST00000495835 C16orf86Q6ZW13 317 aa29.1■■■□□ 2.25
HLA-C-209ENST00000495835 PI4K2BQ8TCG2 481 aa29.1■■■□□ 2.25
HLA-C-209ENST00000495835 ARPP21Q9UBL0 812 aaPredicted RBP29.1■■■□□ 2.25
HLA-C-209ENST00000495835 MPHOSPH10O00566 681 aaKnown RBP29.09■■■□□ 2.25
HLA-C-209ENST00000495835 CYP2D6P10635 497 aa29.09■■■□□ 2.25
HLA-C-209ENST00000495835 GNAT2P19087 354 aa29.09■■■□□ 2.25
HLA-C-209ENST00000495835 CATSPERGQ6ZRH7 1159 aa29.09■■■□□ 2.25
HLA-C-209ENST00000495835 ACER1Q8TDN7 264 aa29.09■■■□□ 2.25
HLA-C-209ENST00000495835 RBPJLQ9UBG7 517 aa29.09■■■□□ 2.25
HLA-C-209ENST00000495835 BIN2Q9UBW5 565 aaPredicted RBP29.09■■■□□ 2.25
HLA-C-209ENST00000495835 MX1P20591 662 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 EVX2Q03828 476 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 SBK1Q52WX2 424 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 TSHZ3Q63HK5 1081 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 CTR9Q6PD62 1173 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 LBX2Q6XYB7 198 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 DYNLL2Q96FJ2 89 aa29.08■■■□□ 2.25
HLA-C-209ENST00000495835 VCAM1P19320 739 aa29.07■■■□□ 2.24
HLA-C-209ENST00000495835 CDK8P49336 464 aa29.07■■■□□ 2.24
HLA-C-209ENST00000495835 MTFR1Q15390 333 aa29.07■■■□□ 2.24
HLA-C-209ENST00000495835 OSBP2Q969R2 916 aa29.07■■■□□ 2.24
HLA-C-209ENST00000495835 RABGAP1Q9Y3P9 1069 aa29.07■■■□□ 2.24
HLA-C-209ENST00000495835 SALL3Q9BXA9 1300 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 GJB1P08034 283 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 MAPK4P31152 587 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 ERVK-9P63128 1117 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 ERVK-24P63145 666 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 ZYXQ15942 572 aaKnown RBP29.06■■■□□ 2.24
HLA-C-209ENST00000495835 PRPF38BQ5VTL8 546 aaKnown RBP29.06■■■□□ 2.24
HLA-C-209ENST00000495835 SH2D4AQ9H788 454 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 GJD2Q9UKL4 321 aa29.06■■■□□ 2.24
HLA-C-209ENST00000495835 CCL5P13501 91 aa29.05■■■□□ 2.24
HLA-C-209ENST00000495835 ANKRD45Q5TZF3 282 aa29.05■■■□□ 2.24
HLA-C-209ENST00000495835 SLC44A5Q8NCS7 719 aa29.05■■■□□ 2.24
HLA-C-209ENST00000495835 TXNRD2Q9NNW7 524 aa29.05■■■□□ 2.24
HLA-C-209ENST00000495835 GSG1L2A8MUP6 293 aa29.04■■■□□ 2.24
HLA-C-209ENST00000495835 MYCP01106 439 aaPredicted RBP29.04■■■□□ 2.24
HLA-C-209ENST00000495835 GJA8P48165 433 aa29.04■■■□□ 2.24
HLA-C-209ENST00000495835 RNF208Q9H0X6 261 aa29.04■■■□□ 2.24
HLA-C-209ENST00000495835 ARHGEF10LQ9HCE6 1279 aa29.04■■■□□ 2.24
HLA-C-209ENST00000495835 A0A1W2PRG0 241 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 GPAA1O43292 621 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 CCNA1P78396 465 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 TICAM2Q86XR7 235 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 LPAR1Q92633 364 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 STAP2Q9UGK3 403 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 TMX2Q9Y320 296 aa29.03■■■□□ 2.24
HLA-C-209ENST00000495835 CYP2D7A0A087X1C5 515 aa29.02■■■□□ 2.24
HLA-C-209ENST00000495835 AKR1B1P15121 316 aa29.02■■■□□ 2.24
HLA-C-209ENST00000495835 Q3C1V9 767 aa29.02■■■□□ 2.24
HLA-C-209ENST00000495835 CCAR1Q8IX12 1150 aaKnown RBP29.02■■■□□ 2.24
HLA-C-209ENST00000495835 OTUD7AQ8TE49 926 aaPredicted RBP29.02■■■□□ 2.24
HLA-C-209ENST00000495835 SOCS4Q8WXH5 440 aa29.02■■■□□ 2.24
HLA-C-209ENST00000495835 HOXC10Q9NYD6 342 aa29.02■■■□□ 2.24
HLA-C-209ENST00000495835 INHAP05111 366 aa29.01■■■□□ 2.23
HLA-C-209ENST00000495835 XRCC5P13010 732 aaKnown RBP29.01■■■□□ 2.23
HLA-C-209ENST00000495835 ELNP15502 786 aa29.01■■■□□ 2.23
HLA-C-209ENST00000495835 ICA1Q05084 483 aa29.01■■■□□ 2.23
HLA-C-209ENST00000495835 NUDT12Q9BQG2 462 aa29.01■■■□□ 2.23
HLA-C-209ENST00000495835 RWDD1Q9H446 243 aaPredicted RBP29.01■■■□□ 2.23
HLA-C-209ENST00000495835 RPAP3Q9H6T3 665 aaPredicted RBP29.01■■■□□ 2.23
HLA-C-209ENST00000495835 KANSL2Q9H9L4 492 aa29.01■■■□□ 2.23
HLA-C-209ENST00000495835 PLXNB2O15031 1838 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 PATL2C9JE40 543 aaKnown RBP29■■■□□ 2.23
HLA-C-209ENST00000495835 COG2Q14746 738 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 POTEEQ6S8J3 1075 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 SIAH1Q8IUQ4 282 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 TRMT44Q8IYL2 757 aaKnown RBP29■■■□□ 2.23
HLA-C-209ENST00000495835 PAGR1Q9BTK6 254 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 FSD1Q9BTV5 496 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 ZNF287Q9HBT7 754 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 ROBO3Q96MS0 1386 aa29■■■□□ 2.23
HLA-C-209ENST00000495835 HMGCRP04035 888 aa28.99■■■□□ 2.23
HLA-C-209ENST00000495835 ZMYM1Q5SVZ6 1142 aa28.98■■■□□ 2.23
HLA-C-209ENST00000495835 PLEKHH3Q7Z736 793 aa28.98■■■□□ 2.23
HLA-C-209ENST00000495835 NACAP1Q9BZK3 213 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms