RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 TRIM22Q8IYM9 498 aa28.41■■■□□ 2.14
PPP1R3F-205ENST00000495799 CSRNP1Q96S65 589 aa28.41■■■□□ 2.14
PPP1R3F-205ENST00000495799 FAM217BQ9NTX9 383 aaPredicted RBP28.41■■■□□ 2.14
PPP1R3F-205ENST00000495799 HERC5Q9UII4 1024 aaKnown RBP28.41■■■□□ 2.14
PPP1R3F-205ENST00000495799 F13A1P00488 732 aa28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 YBX3P16989 372 aaKnown RBP eCLIP28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 KIF5BP33176 963 aa28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 MCM4P33991 863 aa28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 SSRP1Q08945 709 aaKnown RBP28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 WASF1Q92558 559 aa28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 STX8Q9UNK0 236 aa28.4■■■□□ 2.14
PPP1R3F-205ENST00000495799 BAG4O95429 457 aaKnown RBP28.39■■■□□ 2.14
PPP1R3F-205ENST00000495799 NTRK3Q16288 839 aa28.39■■■□□ 2.14
PPP1R3F-205ENST00000495799 FOXD4L5Q5VV16 416 aaPredicted RBP28.39■■■□□ 2.14
PPP1R3F-205ENST00000495799 PNMA1Q8ND90 353 aa28.39■■■□□ 2.14
PPP1R3F-205ENST00000495799 FOXD4L4Q8WXT5 416 aaPredicted RBP28.39■■■□□ 2.14
PPP1R3F-205ENST00000495799 NOVP48745 357 aa28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 NBPF9Q3BBW0 867 aa28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 RNF181Q9P0P0 153 aa28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 FMNL1O95466 1100 aaPredicted RBP28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 TOP1P11387 765 aaKnown RBP28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 AKR1B1P15121 316 aa28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 KIF4BQ2VIQ3 1234 aa28.38■■■□□ 2.13
PPP1R3F-205ENST00000495799 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 GREB1LQ9C091 1923 aaPredicted RBP28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 DTNBO60941 627 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 FDPSP14324 419 aaKnown RBP28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 NBR1Q14596 966 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 CERKLQ49MI3 558 aaPredicted RBP28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 TATDN1Q6P1N9 297 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 CEP95Q96GE4 821 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 TMEM47Q9BQJ4 181 aa28.37■■■□□ 2.13
PPP1R3F-205ENST00000495799 GNAQP50148 359 aa28.36■■■□□ 2.13
PPP1R3F-205ENST00000495799 RBM26Q5T8P6 1007 aaKnown RBP28.36■■■□□ 2.13
PPP1R3F-205ENST00000495799 DNAJC18Q9H819 358 aa28.36■■■□□ 2.13
PPP1R3F-205ENST00000495799 IGKV6D-41A0A0C4DH26 115 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 SHTN1A0MZ66 631 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 MPHOSPH10O00566 681 aaKnown RBP28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 AKAP17AQ02040 695 aaKnown RBP28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 CDC37L1Q7L3B6 337 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 C8orf76Q96K31 380 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 SLC26A6Q9BXS9 759 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 MTMR4Q9NYA4 1195 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 GPRC5DQ9NZD1 345 aa28.35■■■□□ 2.13
PPP1R3F-205ENST00000495799 TTLL1O95922 423 aa28.34■■■□□ 2.13
PPP1R3F-205ENST00000495799 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.34■■■□□ 2.13
PPP1R3F-205ENST00000495799 RNF26Q9BY78 433 aaPredicted RBP28.34■■■□□ 2.13
PPP1R3F-205ENST00000495799 ZSCAN16Q9H4T2 348 aaPredicted RBP28.34■■■□□ 2.13
PPP1R3F-205ENST00000495799 TBC1D12O60347 775 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 DEXIO95424 95 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 TBC1D10BQ4KMP7 808 aaPredicted RBP28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 PHKBQ93100 1093 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 GRM4Q14833 912 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 TMEM179Q6ZVK1 233 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 TMTC3Q6ZXV5 915 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 SAMD7Q7Z3H4 446 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 ALG1Q9BT22 464 aa28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 RBM27Q9P2N5 1060 aaKnown RBP28.33■■■□□ 2.13
PPP1R3F-205ENST00000495799 GOLGB1Q14789 3259 aaKnown RBP28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 GRIN3BO60391 1043 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 TRIM29Q14134 588 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 GPR162Q16538 588 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 C9orf131Q5VYM1 1079 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 LZTS2Q9BRK4 669 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 CABP5Q9NP86 173 aa28.32■■■□□ 2.12
PPP1R3F-205ENST00000495799 LMOD1P29536 600 aaPredicted RBP28.31■■■□□ 2.12
PPP1R3F-205ENST00000495799 ABCB5Q2M3G0 1257 aa28.31■■■□□ 2.12
PPP1R3F-205ENST00000495799 NBPF11Q86T75 865 aa28.31■■■□□ 2.12
PPP1R3F-205ENST00000495799 APOBEC3FQ8IUX4 373 aaKnown RBP28.31■■■□□ 2.12
PPP1R3F-205ENST00000495799 FAM196BA6NMK8 535 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 PPFIA3O75145 1194 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 MCTP1Q6DN14 999 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 TMEM39BQ9GZU3 492 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 KANSL2Q9H9L4 492 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 MYH6P13533 1939 aa28.3■■■□□ 2.12
PPP1R3F-205ENST00000495799 ZC3H4Q9UPT8 1303 aaKnown RBP28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 PRPF3O43395 683 aaKnown RBP28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 EGFRP00533 1210 aa28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 RASA3Q14644 834 aa28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 FBXO18Q8NFZ0 1043 aa28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 HACL1Q9UJ83 578 aa28.29■■■□□ 2.12
PPP1R3F-205ENST00000495799 PLEKHA8P1O95397 391 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 XBP1P17861 261 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 FOSBP53539 338 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 CSPP1Q1MSJ5 1256 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 NYAP2Q9P242 653 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 CLIP2Q9UDT6 1046 aa28.28■■■□□ 2.12
PPP1R3F-205ENST00000495799 MYH4Q9Y623 1939 aa28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 PARP1P09874 1014 aaKnown RBP28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 FUT2Q10981 343 aa28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 DPY19L2Q6NUT2 758 aa28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 CCDC82Q8N4S0 544 aa28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 HOOK2Q96ED9 719 aa28.27■■■□□ 2.12
PPP1R3F-205ENST00000495799 CNTNAP5Q8WYK1 1306 aa28.26■■■□□ 2.11
PPP1R3F-205ENST00000495799 RESTQ13127 1097 aa28.26■■■□□ 2.11
PPP1R3F-205ENST00000495799 FERMT3Q86UX7 667 aa28.26■■■□□ 2.11
PPP1R3F-205ENST00000495799 ANP32EQ9BTT0 268 aa28.26■■■□□ 2.11
PPP1R3F-205ENST00000495799 PGAP2Q9UHJ9 254 aa28.26■■■□□ 2.11
PPP1R3F-205ENST00000495799 MAD2L2Q9UI95 211 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms