RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 USP14P54578 494 aa21.44■■□□□ 1.02
TMEM53-209ENST00000495630 LRRC26Q2I0M4 334 aa21.44■■□□□ 1.02
TMEM53-209ENST00000495630 MFSD14CQ5VZR4 134 aa21.44■■□□□ 1.02
TMEM53-209ENST00000495630 CATSPERGQ6ZRH7 1159 aa21.44■■□□□ 1.02
TMEM53-209ENST00000495630 NOP58Q9Y2X3 529 aaKnown RBP21.44■■□□□ 1.02
TMEM53-209ENST00000495630 SLC15A5A6NIM6 579 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 TMED8Q6PL24 325 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-209ENST00000495630 Q7L0L9 218 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 TTC6Q86TZ1 520 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 KIAA1683Q9H0B3 1180 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 EHD4Q9H223 541 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 SERPINB13Q9UIV8 391 aa21.43■■□□□ 1.02
TMEM53-209ENST00000495630 CNMDO75829 334 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 PTPREP23469 700 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 USP5P45974 858 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 LBX2Q6XYB7 198 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 FEZ1Q99689 392 aa21.42■■□□□ 1.02
TMEM53-209ENST00000495630 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
TMEM53-209ENST00000495630 DDX60LQ5H9U9 1706 aaKnown RBP21.41■■□□□ 1.02
TMEM53-209ENST00000495630 MSCO60682 206 aa21.41■■□□□ 1.02
TMEM53-209ENST00000495630 IDH1O75874 414 aaKnown RBP21.41■■□□□ 1.02
TMEM53-209ENST00000495630 HOXC6P09630 235 aa21.41■■□□□ 1.02
TMEM53-209ENST00000495630 CERKLQ49MI3 558 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-209ENST00000495630 ZKSCAN2Q63HK3 967 aa21.41■■□□□ 1.02
TMEM53-209ENST00000495630 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
TMEM53-209ENST00000495630 ATP2B2Q01814 1243 aa21.4■■□□□ 1.02
TMEM53-209ENST00000495630 RAB3GAP1Q15042 981 aa21.4■■□□□ 1.02
TMEM53-209ENST00000495630 ZYXQ15942 572 aaKnown RBP21.4■■□□□ 1.02
TMEM53-209ENST00000495630 CABP5Q9NP86 173 aa21.4■■□□□ 1.02
TMEM53-209ENST00000495630 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 MDM2Q00987 491 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-209ENST00000495630 ABCB5Q2M3G0 1257 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 MAGEB6Q8N7X4 407 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 MIGA1Q8NAN2 632 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 EAF2Q96CJ1 260 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-209ENST00000495630 SENP6Q9GZR1 1112 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-209ENST00000495630 CCDC8Q9H0W5 538 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-209ENST00000495630 FLRT1Q9NZU1 646 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 DDX20Q9UHI6 824 aaKnown RBP21.39■■□□□ 1.01
TMEM53-209ENST00000495630 IVNS1ABPQ9Y6Y0 642 aa21.39■■□□□ 1.01
TMEM53-209ENST00000495630 VCAM1P19320 739 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 MAP3K12Q12852 859 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 FAM109BQ6ICB4 259 aaPredicted RBP21.38■■□□□ 1.01
TMEM53-209ENST00000495630 ACER1Q8TDN7 264 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 LPAR1Q92633 364 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 LBHD1Q9BQE6 289 aaPredicted RBP21.38■■□□□ 1.01
TMEM53-209ENST00000495630 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
TMEM53-209ENST00000495630 POTEB2H3BUK9 544 aa21.37■■□□□ 1.01
TMEM53-209ENST00000495630 CNGA1P29973 690 aa21.37■■□□□ 1.01
TMEM53-209ENST00000495630 GRB14Q14449 540 aa21.37■■□□□ 1.01
TMEM53-209ENST00000495630 HOXC10Q9NYD6 342 aa21.37■■□□□ 1.01
TMEM53-209ENST00000495630 TLR7Q9NYK1 1049 aaKnown RBP21.37■■□□□ 1.01
TMEM53-209ENST00000495630 BTBD7Q9P203 1132 aa21.37■■□□□ 1.01
TMEM53-209ENST00000495630 DNM1LO00429 736 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 STRNO43815 780 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 IGHA2P01877 340 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 SHMT1P34896 483 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 PLCD1P51178 756 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 NPLOC4Q8TAT6 608 aa21.35■■□□□ 1.01
TMEM53-209ENST00000495630 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
TMEM53-209ENST00000495630 SPDYE16A6NNV3 312 aaPredicted RBP21.34■■□□□ 1.01
TMEM53-209ENST00000495630 POLR3DP05423 398 aaPredicted RBP21.34■■□□□ 1.01
TMEM53-209ENST00000495630 CYP2C19P33261 490 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 GUCY1A2P33402 732 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 COG2Q14746 738 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 ARRDC4Q8NCT1 418 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
TMEM53-209ENST00000495630 MAST2Q6P0Q8 1798 aa21.33■■□□□ 1.01
TMEM53-209ENST00000495630 OLFML2BQ68BL8 750 aa21.33■■□□□ 1.01
TMEM53-209ENST00000495630 DPP9Q86TI2 863 aa21.33■■□□□ 1.01
TMEM53-209ENST00000495630 RIOK1Q9BRS2 568 aaKnown RBP21.33■■□□□ 1.01
TMEM53-209ENST00000495630 PRKAG2Q9UGJ0 569 aa21.33■■□□□ 1.01
TMEM53-209ENST00000495630 FOCADQ5VW36 1801 aa21.33■■□□□ 1.01
TMEM53-209ENST00000495630 ATN1P54259 1190 aaPredicted RBP21.32■■□□□ 1
TMEM53-209ENST00000495630 GABPAQ06546 454 aa21.32■■□□□ 1
TMEM53-209ENST00000495630 SEPT2Q15019 361 aa21.32■■□□□ 1
TMEM53-209ENST00000495630 TRPV1Q8NER1 839 aa21.32■■□□□ 1
TMEM53-209ENST00000495630 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
TMEM53-209ENST00000495630 MAGEB6P1A0A0J9YX57 407 aa21.31■■□□□ 1
TMEM53-209ENST00000495630 CYBAP13498 195 aa21.31■■□□□ 1
TMEM53-209ENST00000495630 TTF1Q15361 905 aaPredicted RBP21.31■■□□□ 1
TMEM53-209ENST00000495630 ERC1Q8IUD2 1116 aa21.31■■□□□ 1
TMEM53-209ENST00000495630 FTSJ3Q8IY81 847 aaKnown RBP21.31■■□□□ 1
TMEM53-209ENST00000495630 SHCBP1Q8NEM2 672 aa21.31■■□□□ 1
TMEM53-209ENST00000495630 MOV10L1Q9BXT6 1211 aaKnown RBP21.31■■□□□ 1
TMEM53-209ENST00000495630 CUL9Q8IWT3 2517 aa21.3■■□□□ 1
TMEM53-209ENST00000495630 ADORA2AP29274 412 aa21.3■■□□□ 1
TMEM53-209ENST00000495630 RTP1P59025 263 aa21.3■■□□□ 1
TMEM53-209ENST00000495630 CRNKL1Q9BZJ0 848 aaKnown RBP21.3■■□□□ 1
TMEM53-209ENST00000495630 SPATC1LQ9H0A9 340 aa21.3■■□□□ 1
TMEM53-209ENST00000495630 SLC5A4Q9NY91 659 aa21.3■■□□□ 1
TMEM53-209ENST00000495630 A0A1W2PRG0 241 aa21.29■■□□□ 1
TMEM53-209ENST00000495630 GJC2Q5T442 439 aaPredicted RBP21.29■■□□□ 1
TMEM53-209ENST00000495630 SLC39A5Q6ZMH5 540 aa21.29■■□□□ 1
TMEM53-209ENST00000495630 AACSQ86V21 672 aa21.29■■□□□ 1
TMEM53-209ENST00000495630 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
TMEM53-209ENST00000495630 MB21D1Q8N884 522 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms