RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 KANK3Q6NY19 840 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
CALD1-222ENST00000495522 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
CALD1-222ENST00000495522 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 SFPQP23246 707 aaKnown RBP eCLIP17.56■□□□□ 0.4
CALD1-222ENST00000495522 PDE4BQ07343 736 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 NT5DC1Q5TFE4 455 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 CEP135Q66GS9 1140 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
CALD1-222ENST00000495522 CNTNAP5Q8WYK1 1306 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 IRS2Q9Y4H2 1338 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 NPHP1O15259 732 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
CALD1-222ENST00000495522 NRDCO43847 1150 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 BMP15O95972 392 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 SERPINC1P01008 464 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 UBASH3AP57075 661 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 ARMCX5Q6P1M9 558 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 CCAR2Q8N163 923 aaKnown RBP17.56■□□□□ 0.4
CALD1-222ENST00000495522 ZNF710Q8N1W2 664 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 MAN1B1Q9UKM7 699 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
CALD1-222ENST00000495522 EVX2Q03828 476 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 PDE4CQ08493 712 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 NYAP1Q6ZVC0 841 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 TXNRD3Q86VQ6 643 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 SMARCE1Q969G3 411 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 DACH1Q9UI36 760 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 PRDM4Q9UKN5 801 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
CALD1-222ENST00000495522 IGSF3O75054 1194 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 CYP2D6P10635 497 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 BMP6P22004 513 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
CALD1-222ENST00000495522 FAM47AQ5JRC9 791 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 TRIML1Q8N9V2 468 aa17.55■□□□□ 0.4
CALD1-222ENST00000495522 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
CALD1-222ENST00000495522 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
CALD1-222ENST00000495522 THSD7AQ9UPZ6 1657 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 NMT2O60551 498 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 KCNJ6P48051 423 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 EARS2Q5JPH6 523 aaKnown RBP17.54■□□□□ 0.4
CALD1-222ENST00000495522 AMIGO3Q86WK7 504 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 SRBD1Q8N5C6 995 aaKnown RBP17.54■□□□□ 0.4
CALD1-222ENST00000495522 MLKLQ8NB16 471 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
CALD1-222ENST00000495522 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
CALD1-222ENST00000495522 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 PRR29P0C7W0 189 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 NT5C2P49902 561 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 CFAP100Q494V2 611 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 PDILTQ8N807 584 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 TNFRSF25Q93038 417 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 FANCLQ9NW38 375 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 RFC4P35249 363 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 GRAPQ13588 217 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 MORC3Q14149 939 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 NPY5RQ15761 445 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 USP49Q70CQ1 688 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 WDR66Q8TBY9 1149 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
CALD1-222ENST00000495522 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
CALD1-222ENST00000495522 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
CALD1-222ENST00000495522 A0A0U1RQG5 324 aaPredicted RBP17.52■□□□□ 0.4
CALD1-222ENST00000495522 DPF2Q92785 391 aa17.52■□□□□ 0.4
CALD1-222ENST00000495522 LY75O60449 1722 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 KIF2AO00139 706 aaPredicted RBP17.52■□□□□ 0.39
CALD1-222ENST00000495522 LDHBP07195 334 aaKnown RBP17.52■□□□□ 0.39
CALD1-222ENST00000495522 SCG2P13521 617 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 KIF5BP33176 963 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 GRAMD1CQ8IYS0 662 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 SPATA20Q8TB22 786 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 ZNF592Q92610 1267 aa17.52■□□□□ 0.39
CALD1-222ENST00000495522 QTRT2Q9H974 415 aaKnown RBP17.52■□□□□ 0.39
CALD1-222ENST00000495522 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
CALD1-222ENST00000495522 TTC38Q5R3I4 469 aa17.51■□□□□ 0.39
CALD1-222ENST00000495522 VSTM4Q8IW00 320 aa17.51■□□□□ 0.39
CALD1-222ENST00000495522 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
CALD1-222ENST00000495522 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
CALD1-222ENST00000495522 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
CALD1-222ENST00000495522 USP5P45974 858 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 GSTO1P78417 241 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 SYCP1Q15431 976 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CALD1-222ENST00000495522 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 C12orf60Q5U649 245 aa17.5■□□□□ 0.39
CALD1-222ENST00000495522 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms