RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
PHF1-211ENST00000495509 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
PHF1-211ENST00000495509 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
PHF1-211ENST00000495509 NMRK2Q9NPI5 230 aa18.39■□□□□ 0.53
PHF1-211ENST00000495509 STX8Q9UNK0 236 aa18.39■□□□□ 0.53
PHF1-211ENST00000495509 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 PFKFB2O60825 505 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 GH2P01242 217 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 HSP90AA1P07900 732 aaKnown RBP18.38■□□□□ 0.53
PHF1-211ENST00000495509 SEPT2Q15019 361 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 ABCB5Q2M3G0 1257 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 ANKS1AQ92625 1134 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
PHF1-211ENST00000495509 PLIN4Q96Q06 1357 aa18.38■□□□□ 0.53
PHF1-211ENST00000495509 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 TMEM47Q9BQJ4 181 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 GLIS2Q9BZE0 524 aaPredicted RBP18.37■□□□□ 0.53
PHF1-211ENST00000495509 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.37■□□□□ 0.53
PHF1-211ENST00000495509 PPP2R3BQ9Y5P8 575 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 ZBTB43O43298 467 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
PHF1-211ENST00000495509 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 CAP2P40123 477 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 NOVP48745 357 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 SIAH1Q8IUQ4 282 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 FAM217BQ9NTX9 383 aaPredicted RBP18.36■□□□□ 0.53
PHF1-211ENST00000495509 SSC5DA1L4H1 1573 aa18.36■□□□□ 0.53
PHF1-211ENST00000495509 CDC27P30260 824 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
PHF1-211ENST00000495509 TROAPQ12815 778 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 PRKG1Q13976 671 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 MAP1SQ66K74 1059 aaPredicted RBP18.35■□□□□ 0.53
PHF1-211ENST00000495509 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 CTDNEP1O95476 244 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 INPP5BP32019 993 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 METAP2P50579 478 aaKnown RBP eCLIP18.35■□□□□ 0.534e-6■■□□□ 13.2
PHF1-211ENST00000495509 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 PNMA1Q8ND90 353 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 CABP5Q9NP86 173 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 MTMR7Q9Y216 660 aa18.35■□□□□ 0.53
PHF1-211ENST00000495509 MYH4Q9Y623 1939 aa18.34■□□□□ 0.53
PHF1-211ENST00000495509 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
PHF1-211ENST00000495509 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
PHF1-211ENST00000495509 RASGRP2Q7LDG7 609 aa18.34■□□□□ 0.53
PHF1-211ENST00000495509 CCDC84Q86UT8 332 aaPredicted RBP18.34■□□□□ 0.53
PHF1-211ENST00000495509 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PHF1-211ENST00000495509 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
PHF1-211ENST00000495509 ZBTB21Q9ULJ3 1066 aa18.34■□□□□ 0.53
PHF1-211ENST00000495509 JAK2O60674 1132 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 USP2O75604 605 aaPredicted RBP18.33■□□□□ 0.53
PHF1-211ENST00000495509 TTLL1O95922 423 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.53
PHF1-211ENST00000495509 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.532e-6■□□□□ 10.3
PHF1-211ENST00000495509 DCAF15Q66K64 600 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 LRRC47Q8N1G4 583 aaKnown RBP18.33■□□□□ 0.53
PHF1-211ENST00000495509 FANCBQ8NB91 859 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 CDCA5Q96FF9 252 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.53
PHF1-211ENST00000495509 CMTR1Q8N1G2 835 aaKnown RBP18.32■□□□□ 0.52
PHF1-211ENST00000495509 ZKSCAN4Q969J2 545 aaPredicted RBP18.32■□□□□ 0.52
PHF1-211ENST00000495509 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 BAZ2BQ9UIF8 2168 aaKnown RBP18.32■□□□□ 0.52
PHF1-211ENST00000495509 TRAF5O00463 557 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 CTNND1O60716 968 aaKnown RBP18.32■□□□□ 0.52
PHF1-211ENST00000495509 ICA1Q05084 483 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 ATAD5Q96QE3 1844 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 WRNIP1Q96S55 665 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
PHF1-211ENST00000495509 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
PHF1-211ENST00000495509 A0A1W2PRG0 241 aa18.31■□□□□ 0.52
PHF1-211ENST00000495509 DDAH1O94760 285 aa18.31■□□□□ 0.52
PHF1-211ENST00000495509 RTN1Q16799 776 aa18.31■□□□□ 0.52
PHF1-211ENST00000495509 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
PHF1-211ENST00000495509 DDIT3P35638 169 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 NTRK3Q16288 839 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 ACER1Q8TDN7 264 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 MKL1Q969V6 931 aa18.3■□□□□ 0.52
PHF1-211ENST00000495509 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms