RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 IFIT5Q13325 482 aaKnown RBP11.35□□□□□ -0.59
GARNL3-219ENST00000495172 C1orf53Q5VUE5 145 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 POTEHQ6S545 545 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 LDHAL6AQ6ZMR3 332 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 OTOP2Q7RTS6 562 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 KCNH6Q9H252 994 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
GARNL3-219ENST00000495172 PLXNA3P51805 1871 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 COL4A4P53420 1690 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-219ENST00000495172 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-219ENST00000495172 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 CNMDO75829 334 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-219ENST00000495172 MTMR2Q13614 643 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 GCKRQ14397 625 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 KSR2Q6VAB6 950 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 G2E3Q7L622 706 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 VPS37DQ86XT2 251 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 TBX21Q9UL17 535 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 TECTAO75443 2155 aa11.34□□□□□ -0.59
GARNL3-219ENST00000495172 MYBBP1AQ9BQG0 1328 aaKnown RBP11.34□□□□□ -0.59
GARNL3-219ENST00000495172 DCXO43602 365 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
GARNL3-219ENST00000495172 ALADP13716 330 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
GARNL3-219ENST00000495172 JAG1P78504 1218 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
GARNL3-219ENST00000495172 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.66e-7■■■■■ 27
GARNL3-219ENST00000495172 PICALMQ13492 652 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 CCDC146Q8IYE0 955 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 PHF24Q9UPV7 400 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 FAM186AA6NE01 2351 aa11.33□□□□□ -0.6
GARNL3-219ENST00000495172 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 IGHA2P01877 340 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 CA3P07451 260 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 PTPREP23469 700 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 PRDX5P30044 214 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 CYP2C18P33260 490 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 LMBR1LQ6UX01 489 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-219ENST00000495172 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 UMODL1Q5DID0 1318 aa11.32□□□□□ -0.6
GARNL3-219ENST00000495172 SEPT4O43236 478 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 DDX58O95786 925 aaKnown RBP11.31□□□□□ -0.6
GARNL3-219ENST00000495172 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 CNTNAP3BQ96NU0 1288 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
GARNL3-219ENST00000495172 POU3F3P20264 500 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-219ENST00000495172 PTPN5P54829 565 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 GRB10Q13322 594 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 ACACBO00763 2458 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 MAST3O60307 1309 aa11.3□□□□□ -0.6
GARNL3-219ENST00000495172 RFX7Q2KHR2 1363 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 DCDC2CA8MYV0 355 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 LPXNO60711 386 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 KCNA5P22460 613 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-219ENST00000495172 GRB14Q14449 540 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 PSRC1Q6PGN9 363 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-219ENST00000495172 ERMP1Q7Z2K6 904 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 ANKRD33Q7Z3H0 272 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 UBE2ZQ9H832 354 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-219ENST00000495172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
GARNL3-219ENST00000495172 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
GARNL3-219ENST00000495172 XPNPEP3Q9NQH7 507 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 MYH2Q9UKX2 1941 aa11.29□□□□□ -0.6
GARNL3-219ENST00000495172 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 COBLO75128 1261 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 FGBP02675 491 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 HOXC6P09630 235 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-219ENST00000495172 ID4P47928 161 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 COL9A2Q14055 689 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-219ENST00000495172 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 COL26A1Q96A83 441 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 IL23AQ9NPF7 189 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
GARNL3-219ENST00000495172 SETXQ7Z333 2677 aaKnown RBP11.28□□□□□ -0.6
GARNL3-219ENST00000495172 MAP1BP46821 2468 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms